Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.22■□□□□ 0.67
CD40P25942 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.22■□□□□ 0.67
CD40P25942 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CD40P25942 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CD40P25942 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CD40P25942 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.22■□□□□ 0.67
CD40P25942 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CD40P25942 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CD40P25942 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CD40P25942 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CD40P25942 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CD40P25942 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CD40P25942 IRS3P-201ENST00000223076 1006 ntBASIC19.21■□□□□ 0.67
CD40P25942 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CD40P25942 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CD40P25942 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.21■□□□□ 0.67
CD40P25942 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.21■□□□□ 0.67
CD40P25942 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CD40P25942 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CD40P25942 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.21■□□□□ 0.67
CD40P25942 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.21■□□□□ 0.67
CD40P25942 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CD40P25942 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CD40P25942 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
CD40P25942 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CD40P25942 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.2■□□□□ 0.66
CD40P25942 RARRES2P6-201ENST00000567333 442 ntBASIC19.2■□□□□ 0.66
CD40P25942 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CD40P25942 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CD40P25942 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CD40P25942 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CD40P25942 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.19■□□□□ 0.66
CD40P25942 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CD40P25942 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.19■□□□□ 0.66
CD40P25942 AC010525.1-201ENST00000585559 441 ntBASIC19.19■□□□□ 0.66
CD40P25942 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CD40P25942 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CD40P25942 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CD40P25942 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CD40P25942 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.19■□□□□ 0.66
CD40P25942 AL353803.4-201ENST00000565882 1934 ntBASIC19.19■□□□□ 0.66
CD40P25942 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CD40P25942 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CD40P25942 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CD40P25942 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CD40P25942 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CD40P25942 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CD40P25942 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CD40P25942 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.18■□□□□ 0.66
CD40P25942 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.18■□□□□ 0.66
CD40P25942 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CD40P25942 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CD40P25942 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CD40P25942 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CD40P25942 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.17■□□□□ 0.66
CD40P25942 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CD40P25942 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CD40P25942 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CD40P25942 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CD40P25942 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.17■□□□□ 0.66
CD40P25942 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CD40P25942 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CD40P25942 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CD40P25942 TSPY26P-201ENST00000476365 1326 ntBASIC19.17■□□□□ 0.66
CD40P25942 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CD40P25942 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
CD40P25942 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CD40P25942 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CD40P25942 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CD40P25942 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CD40P25942 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CD40P25942 IGHV3-19-201ENST00000521488 291 ntBASIC19.16■□□□□ 0.66
CD40P25942 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.16■□□□□ 0.66
CD40P25942 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CD40P25942 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CD40P25942 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CD40P25942 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD40P25942 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.15■□□□□ 0.66
CD40P25942 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD40P25942 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD40P25942 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.15■□□□□ 0.66
CD40P25942 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD40P25942 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD40P25942 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CD40P25942 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CD40P25942 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.15■□□□□ 0.66
CD40P25942 AC026271.2-201ENST00000428091 497 ntBASIC19.15■□□□□ 0.66
CD40P25942 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.15■□□□□ 0.66
CD40P25942 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.15■□□□□ 0.66
CD40P25942 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.15■□□□□ 0.66
CD40P25942 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD40P25942 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.15■□□□□ 0.66
CD40P25942 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.15■□□□□ 0.66
CD40P25942 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.15■□□□□ 0.66
CD40P25942 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CD40P25942 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CD40P25942 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD40P25942 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD40P25942 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CD40P25942 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms