Protein–RNA interactions for Protein: P25440

BRD2, Bromodomain-containing protein 2, humanhuman

Known RBP Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD2P25440 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
BRD2P25440 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC23.78■■□□□ 1.4
BRD2P25440 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
BRD2P25440 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
BRD2P25440 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
BRD2P25440 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
BRD2P25440 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
BRD2P25440 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
BRD2P25440 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.77■■□□□ 1.4
BRD2P25440 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.77■■□□□ 1.4
BRD2P25440 AC131281.2-201ENST00000520478 145 ntBASIC23.77■■□□□ 1.4
BRD2P25440 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.77■■□□□ 1.4
BRD2P25440 MIR4466-201ENST00000606121 54 ntBASIC23.77■■□□□ 1.4
BRD2P25440 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
BRD2P25440 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC23.76■■□□□ 1.39
BRD2P25440 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.76■■□□□ 1.39
BRD2P25440 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC23.76■■□□□ 1.39
BRD2P25440 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC23.76■■□□□ 1.39
BRD2P25440 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
BRD2P25440 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
BRD2P25440 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
BRD2P25440 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
BRD2P25440 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC23.76■■□□□ 1.39
BRD2P25440 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
BRD2P25440 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC23.75■■□□□ 1.39
BRD2P25440 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23.75■■□□□ 1.39
BRD2P25440 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.75■■□□□ 1.39
BRD2P25440 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.75■■□□□ 1.39
BRD2P25440 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
BRD2P25440 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.75■■□□□ 1.39
BRD2P25440 LINC01529-204ENST00000636474 1715 ntBASIC23.75■■□□□ 1.39
BRD2P25440 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
BRD2P25440 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
BRD2P25440 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
BRD2P25440 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
BRD2P25440 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC23.74■■□□□ 1.39
BRD2P25440 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
BRD2P25440 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.74■■□□□ 1.39
BRD2P25440 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
BRD2P25440 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
BRD2P25440 FP325331.1-202ENST00000623531 1380 ntBASIC23.74■■□□□ 1.39
BRD2P25440 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
BRD2P25440 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
BRD2P25440 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
BRD2P25440 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
BRD2P25440 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC23.73■■□□□ 1.39
BRD2P25440 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
BRD2P25440 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.73■■□□□ 1.39
BRD2P25440 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
BRD2P25440 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
BRD2P25440 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
BRD2P25440 GATM-206ENST00000558336 1522 ntTSL 2 BASIC23.73■■□□□ 1.39
BRD2P25440 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
BRD2P25440 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
BRD2P25440 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.73■■□□□ 1.39
BRD2P25440 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.72■■□□□ 1.39
BRD2P25440 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
BRD2P25440 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
BRD2P25440 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23.72■■□□□ 1.39
BRD2P25440 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
BRD2P25440 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
BRD2P25440 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
BRD2P25440 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC23.72■■□□□ 1.39
BRD2P25440 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC23.72■■□□□ 1.39
BRD2P25440 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
BRD2P25440 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
BRD2P25440 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
BRD2P25440 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
BRD2P25440 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
BRD2P25440 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.72■■□□□ 1.39
BRD2P25440 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
BRD2P25440 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
BRD2P25440 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC23.71■■□□□ 1.39
BRD2P25440 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
BRD2P25440 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
BRD2P25440 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
BRD2P25440 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
BRD2P25440 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.71■■□□□ 1.39
BRD2P25440 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC23.71■■□□□ 1.39
BRD2P25440 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
BRD2P25440 AL024507.2-201ENST00000606070 2574 ntBASIC23.71■■□□□ 1.39
BRD2P25440 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC23.7■■□□□ 1.39
BRD2P25440 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
BRD2P25440 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
BRD2P25440 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
BRD2P25440 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC23.7■■□□□ 1.38
BRD2P25440 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
BRD2P25440 AC006455.2-201ENST00000429931 906 ntBASIC23.7■■□□□ 1.38
BRD2P25440 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC23.7■■□□□ 1.38
BRD2P25440 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
BRD2P25440 DUX4L4-201ENST00000566884 1269 ntBASIC23.7■■□□□ 1.38
BRD2P25440 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
BRD2P25440 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC23.69■■□□□ 1.38
BRD2P25440 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC23.69■■□□□ 1.38
BRD2P25440 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
BRD2P25440 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
BRD2P25440 SRD5A1P1-201ENST00000442297 786 ntBASIC23.69■■□□□ 1.38
BRD2P25440 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
BRD2P25440 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC23.69■■□□□ 1.38
BRD2P25440 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC23.69■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms