Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 THA1P-201ENST00000590384 1145 ntBASIC19.49■□□□□ 0.71
ATF1P18846 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.49■□□□□ 0.71
ATF1P18846 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATF1P18846 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATF1P18846 AF131216.4-201ENST00000638924 1588 ntBASIC19.49■□□□□ 0.71
ATF1P18846 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATF1P18846 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
ATF1P18846 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATF1P18846 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATF1P18846 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ATF1P18846 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATF1P18846 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
ATF1P18846 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.48■□□□□ 0.71
ATF1P18846 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATF1P18846 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATF1P18846 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATF1P18846 TSPY13P-201ENST00000338964 914 ntBASIC19.48■□□□□ 0.71
ATF1P18846 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.48■□□□□ 0.71
ATF1P18846 MIR4281-201ENST00000580852 62 ntBASIC19.48■□□□□ 0.71
ATF1P18846 AC010980.1-201ENST00000587192 1142 ntBASIC19.48■□□□□ 0.71
ATF1P18846 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
ATF1P18846 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATF1P18846 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATF1P18846 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.48■□□□□ 0.71
ATF1P18846 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATF1P18846 AC092053.2-201ENST00000640557 1818 ntBASIC19.48■□□□□ 0.71
ATF1P18846 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATF1P18846 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATF1P18846 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.48■□□□□ 0.71
ATF1P18846 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.48■□□□□ 0.71
ATF1P18846 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATF1P18846 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATF1P18846 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATF1P18846 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATF1P18846 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.47■□□□□ 0.71
ATF1P18846 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ATF1P18846 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATF1P18846 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.47■□□□□ 0.71
ATF1P18846 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATF1P18846 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATF1P18846 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATF1P18846 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ATF1P18846 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATF1P18846 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.47■□□□□ 0.71
ATF1P18846 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATF1P18846 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ATF1P18846 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATF1P18846 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.46■□□□□ 0.71
ATF1P18846 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
ATF1P18846 AC079630.1-202ENST00000618127 1840 ntBASIC19.46■□□□□ 0.71
ATF1P18846 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ATF1P18846 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.46■□□□□ 0.71
ATF1P18846 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.45■□□□□ 0.7
ATF1P18846 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATF1P18846 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATF1P18846 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ATF1P18846 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATF1P18846 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATF1P18846 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC19.45■□□□□ 0.7
ATF1P18846 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
ATF1P18846 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ATF1P18846 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
ATF1P18846 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ATF1P18846 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.45■□□□□ 0.7
ATF1P18846 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.45■□□□□ 0.7
ATF1P18846 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.45■□□□□ 0.7
ATF1P18846 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATF1P18846 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
ATF1P18846 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
ATF1P18846 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATF1P18846 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATF1P18846 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATF1P18846 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATF1P18846 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATF1P18846 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATF1P18846 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATF1P18846 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
ATF1P18846 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATF1P18846 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATF1P18846 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATF1P18846 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATF1P18846 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATF1P18846 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATF1P18846 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.43■□□□□ 0.7
ATF1P18846 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
ATF1P18846 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATF1P18846 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.43■□□□□ 0.7
ATF1P18846 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.43■□□□□ 0.7
ATF1P18846 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.43■□□□□ 0.7
ATF1P18846 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.43■□□□□ 0.7
ATF1P18846 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.43■□□□□ 0.7
ATF1P18846 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.43■□□□□ 0.7
ATF1P18846 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.43■□□□□ 0.7
ATF1P18846 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.43■□□□□ 0.7
ATF1P18846 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
ATF1P18846 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.43■□□□□ 0.7
ATF1P18846 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATF1P18846 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
ATF1P18846 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
ATF1P18846 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms