Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 FP325331.1-202ENST00000623531 1380 ntBASIC19.91■□□□□ 0.78
HLA-DOBP13765 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DOBP13765 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DOBP13765 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.91■□□□□ 0.78
HLA-DOBP13765 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DOBP13765 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
HLA-DOBP13765 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
HLA-DOBP13765 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
HLA-DOBP13765 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DOBP13765 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.9■□□□□ 0.78
HLA-DOBP13765 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DOBP13765 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DOBP13765 MIR3621-201ENST00000580529 85 ntBASIC19.9■□□□□ 0.78
HLA-DOBP13765 AL356740.2-201ENST00000601559 647 ntBASIC19.9■□□□□ 0.78
HLA-DOBP13765 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.9■□□□□ 0.78
HLA-DOBP13765 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DOBP13765 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DOBP13765 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.9■□□□□ 0.78
HLA-DOBP13765 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.9■□□□□ 0.78
HLA-DOBP13765 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DOBP13765 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.9■□□□□ 0.78
HLA-DOBP13765 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
HLA-DOBP13765 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.89■□□□□ 0.78
HLA-DOBP13765 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DOBP13765 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.89■□□□□ 0.77
HLA-DOBP13765 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DOBP13765 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
HLA-DOBP13765 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.89■□□□□ 0.77
HLA-DOBP13765 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DOBP13765 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
HLA-DOBP13765 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DOBP13765 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DOBP13765 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DOBP13765 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
HLA-DOBP13765 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.89■□□□□ 0.77
HLA-DOBP13765 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DOBP13765 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DOBP13765 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DOBP13765 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DOBP13765 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DOBP13765 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DOBP13765 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.88■□□□□ 0.77
HLA-DOBP13765 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DOBP13765 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
HLA-DOBP13765 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DOBP13765 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.88■□□□□ 0.77
HLA-DOBP13765 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.88■□□□□ 0.77
HLA-DOBP13765 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.87■□□□□ 0.77
HLA-DOBP13765 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.87■□□□□ 0.77
HLA-DOBP13765 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DOBP13765 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.87■□□□□ 0.77
HLA-DOBP13765 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.87■□□□□ 0.77
HLA-DOBP13765 DUX4L4-201ENST00000566884 1269 ntBASIC19.87■□□□□ 0.77
HLA-DOBP13765 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
HLA-DOBP13765 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.87■□□□□ 0.77
HLA-DOBP13765 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DOBP13765 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DOBP13765 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.86■□□□□ 0.77
HLA-DOBP13765 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DOBP13765 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DOBP13765 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DOBP13765 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DOBP13765 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DOBP13765 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.86■□□□□ 0.77
HLA-DOBP13765 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.86■□□□□ 0.77
HLA-DOBP13765 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.86■□□□□ 0.77
HLA-DOBP13765 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.86■□□□□ 0.77
HLA-DOBP13765 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
HLA-DOBP13765 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DOBP13765 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DOBP13765 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DOBP13765 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.85■□□□□ 0.77
HLA-DOBP13765 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DOBP13765 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.85■□□□□ 0.77
HLA-DOBP13765 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DOBP13765 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DOBP13765 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
HLA-DOBP13765 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.85■□□□□ 0.77
HLA-DOBP13765 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DOBP13765 AC233723.2-201ENST00000623798 2106 ntBASIC19.84■□□□□ 0.77
HLA-DOBP13765 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.84■□□□□ 0.77
HLA-DOBP13765 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DOBP13765 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DOBP13765 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.84■□□□□ 0.77
HLA-DOBP13765 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.84■□□□□ 0.77
HLA-DOBP13765 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.84■□□□□ 0.77
HLA-DOBP13765 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.84■□□□□ 0.77
HLA-DOBP13765 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DOBP13765 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DOBP13765 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DOBP13765 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
HLA-DOBP13765 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DOBP13765 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
HLA-DOBP13765 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DOBP13765 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.84■□□□□ 0.77
HLA-DOBP13765 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HLA-DOBP13765 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
HLA-DOBP13765 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
HLA-DOBP13765 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
HLA-DOBP13765 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms