Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
BMP4P12644 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
BMP4P12644 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BMP4P12644 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
BMP4P12644 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.24■□□□□ 0.83
BMP4P12644 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BMP4P12644 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
BMP4P12644 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
BMP4P12644 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BMP4P12644 AL356441.2-201ENST00000443009 864 ntBASIC20.24■□□□□ 0.83
BMP4P12644 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.24■□□□□ 0.83
BMP4P12644 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.24■□□□□ 0.83
BMP4P12644 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BMP4P12644 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
BMP4P12644 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
BMP4P12644 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
BMP4P12644 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BMP4P12644 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
BMP4P12644 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BMP4P12644 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
BMP4P12644 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BMP4P12644 AC242852.2-201ENST00000615738 1807 ntBASIC20.23■□□□□ 0.83
BMP4P12644 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.23■□□□□ 0.83
BMP4P12644 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
BMP4P12644 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BMP4P12644 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BMP4P12644 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.23■□□□□ 0.83
BMP4P12644 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
BMP4P12644 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
BMP4P12644 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
BMP4P12644 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BMP4P12644 AC137630.3-201ENST00000607245 391 ntBASIC20.23■□□□□ 0.83
BMP4P12644 AC011551.1-201ENST00000614101 683 ntBASIC20.23■□□□□ 0.83
BMP4P12644 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
BMP4P12644 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.23■□□□□ 0.83
BMP4P12644 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BMP4P12644 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BMP4P12644 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
BMP4P12644 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.23■□□□□ 0.83
BMP4P12644 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.22■□□□□ 0.83
BMP4P12644 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
BMP4P12644 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
BMP4P12644 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
BMP4P12644 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
BMP4P12644 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.22■□□□□ 0.83
BMP4P12644 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.22■□□□□ 0.83
BMP4P12644 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
BMP4P12644 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.22■□□□□ 0.83
BMP4P12644 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
BMP4P12644 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
BMP4P12644 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
BMP4P12644 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
BMP4P12644 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
BMP4P12644 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
BMP4P12644 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
BMP4P12644 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.21■□□□□ 0.83
BMP4P12644 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BMP4P12644 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
BMP4P12644 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BMP4P12644 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BMP4P12644 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
BMP4P12644 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BMP4P12644 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BMP4P12644 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
BMP4P12644 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.2■□□□□ 0.82
BMP4P12644 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.2■□□□□ 0.82
BMP4P12644 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
BMP4P12644 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
BMP4P12644 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.2■□□□□ 0.82
BMP4P12644 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
BMP4P12644 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
BMP4P12644 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
BMP4P12644 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
BMP4P12644 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
BMP4P12644 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.19■□□□□ 0.82
BMP4P12644 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
BMP4P12644 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.19■□□□□ 0.82
BMP4P12644 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.19■□□□□ 0.82
BMP4P12644 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
BMP4P12644 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.19■□□□□ 0.82
BMP4P12644 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
BMP4P12644 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
BMP4P12644 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.19■□□□□ 0.82
BMP4P12644 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
BMP4P12644 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.19■□□□□ 0.82
BMP4P12644 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.18■□□□□ 0.82
BMP4P12644 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
BMP4P12644 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
BMP4P12644 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
BMP4P12644 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
BMP4P12644 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
BMP4P12644 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
BMP4P12644 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
BMP4P12644 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
BMP4P12644 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.18■□□□□ 0.82
BMP4P12644 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.18■□□□□ 0.82
BMP4P12644 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.18■□□□□ 0.82
BMP4P12644 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
BMP4P12644 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
BMP4P12644 AC092667.1-201ENST00000434301 2586 ntBASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms