Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UBCP0CG48 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.44■□□□□ 0.7
UBCP0CG48 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBCP0CG48 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UBCP0CG48 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
UBCP0CG48 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBCP0CG48 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
UBCP0CG48 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.44■□□□□ 0.7
UBCP0CG48 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBCP0CG48 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBCP0CG48 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
UBCP0CG48 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.43■□□□□ 0.7
UBCP0CG48 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
UBCP0CG48 AC012354.3-201ENST00000623734 483 ntBASIC19.43■□□□□ 0.7
UBCP0CG48 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBCP0CG48 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.43■□□□□ 0.7
UBCP0CG48 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBCP0CG48 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBCP0CG48 AC144652.1-201ENST00000609974 1624 ntBASIC19.43■□□□□ 0.7
UBCP0CG48 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBCP0CG48 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.43■□□□□ 0.7
UBCP0CG48 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBCP0CG48 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.42■□□□□ 0.7
UBCP0CG48 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.42■□□□□ 0.7
UBCP0CG48 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.42■□□□□ 0.7
UBCP0CG48 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.42■□□□□ 0.7
UBCP0CG48 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.42■□□□□ 0.7
UBCP0CG48 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
UBCP0CG48 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.42■□□□□ 0.7
UBCP0CG48 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBCP0CG48 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBCP0CG48 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
UBCP0CG48 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
UBCP0CG48 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBCP0CG48 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBCP0CG48 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
UBCP0CG48 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBCP0CG48 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBCP0CG48 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UBCP0CG48 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
UBCP0CG48 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UBCP0CG48 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.41■□□□□ 0.7
UBCP0CG48 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBCP0CG48 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
UBCP0CG48 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.41■□□□□ 0.7
UBCP0CG48 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBCP0CG48 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
UBCP0CG48 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
UBCP0CG48 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBCP0CG48 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBCP0CG48 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.4■□□□□ 0.7
UBCP0CG48 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBCP0CG48 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBCP0CG48 YBX1P4-201ENST00000392794 808 ntBASIC19.4■□□□□ 0.7
UBCP0CG48 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.4■□□□□ 0.7
UBCP0CG48 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.4■□□□□ 0.7
UBCP0CG48 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.4■□□□□ 0.7
UBCP0CG48 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
UBCP0CG48 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBCP0CG48 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBCP0CG48 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBCP0CG48 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBCP0CG48 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBCP0CG48 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBCP0CG48 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBCP0CG48 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
UBCP0CG48 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBCP0CG48 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
UBCP0CG48 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBCP0CG48 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBCP0CG48 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.39■□□□□ 0.69
UBCP0CG48 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.39■□□□□ 0.69
UBCP0CG48 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.39■□□□□ 0.69
UBCP0CG48 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBCP0CG48 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
UBCP0CG48 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
UBCP0CG48 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.39■□□□□ 0.69
UBCP0CG48 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBCP0CG48 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBCP0CG48 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBCP0CG48 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBCP0CG48 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.38■□□□□ 0.69
UBCP0CG48 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UBCP0CG48 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UBCP0CG48 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.38■□□□□ 0.69
UBCP0CG48 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UBCP0CG48 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
UBCP0CG48 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.38■□□□□ 0.69
UBCP0CG48 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.38■□□□□ 0.69
UBCP0CG48 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.38■□□□□ 0.69
UBCP0CG48 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
UBCP0CG48 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
UBCP0CG48 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
UBCP0CG48 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.38■□□□□ 0.69
UBCP0CG48 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBCP0CG48 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
UBCP0CG48 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBCP0CG48 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBCP0CG48 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
UBCP0CG48 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms