Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
THBS1P07996 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.47■□□□□ 0.87
THBS1P07996 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
THBS1P07996 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
THBS1P07996 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
THBS1P07996 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.47■□□□□ 0.87
THBS1P07996 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
THBS1P07996 AC127496.7-201ENST00000625110 1798 ntBASIC20.46■□□□□ 0.87
THBS1P07996 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
THBS1P07996 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
THBS1P07996 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
THBS1P07996 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
THBS1P07996 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.46■□□□□ 0.87
THBS1P07996 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
THBS1P07996 TSPY9P-201ENST00000440215 945 ntBASIC20.46■□□□□ 0.87
THBS1P07996 TSPY11P-201ENST00000442607 1045 ntBASIC20.46■□□□□ 0.87
THBS1P07996 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
THBS1P07996 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
THBS1P07996 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
THBS1P07996 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
THBS1P07996 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
THBS1P07996 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.46■□□□□ 0.87
THBS1P07996 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.46■□□□□ 0.87
THBS1P07996 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.87
THBS1P07996 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
THBS1P07996 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
THBS1P07996 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
THBS1P07996 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.45■□□□□ 0.86
THBS1P07996 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
THBS1P07996 ECEL1P1-201ENST00000373592 1742 ntBASIC20.45■□□□□ 0.86
THBS1P07996 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.45■□□□□ 0.86
THBS1P07996 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.45■□□□□ 0.86
THBS1P07996 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
THBS1P07996 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
THBS1P07996 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
THBS1P07996 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
THBS1P07996 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
THBS1P07996 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
THBS1P07996 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
THBS1P07996 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
THBS1P07996 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.44■□□□□ 0.86
THBS1P07996 AL356441.2-201ENST00000443009 864 ntBASIC20.44■□□□□ 0.86
THBS1P07996 AC009086.3-201ENST00000623486 1008 ntBASIC20.44■□□□□ 0.86
THBS1P07996 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
THBS1P07996 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
THBS1P07996 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
THBS1P07996 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
THBS1P07996 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
THBS1P07996 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
THBS1P07996 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
THBS1P07996 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
THBS1P07996 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
THBS1P07996 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.43■□□□□ 0.86
THBS1P07996 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.43■□□□□ 0.86
THBS1P07996 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
THBS1P07996 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
THBS1P07996 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.43■□□□□ 0.86
THBS1P07996 AC131212.1-201ENST00000613771 668 ntBASIC20.43■□□□□ 0.86
THBS1P07996 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
THBS1P07996 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
THBS1P07996 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
THBS1P07996 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
THBS1P07996 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.42■□□□□ 0.86
THBS1P07996 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
THBS1P07996 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
THBS1P07996 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
THBS1P07996 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
THBS1P07996 AC242852.2-201ENST00000615738 1807 ntBASIC20.42■□□□□ 0.86
THBS1P07996 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
THBS1P07996 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
THBS1P07996 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
THBS1P07996 MIR6724-1-201ENST00000616420 92 ntBASIC20.42■□□□□ 0.86
THBS1P07996 MIR6724-2-201ENST00000616483 92 ntBASIC20.42■□□□□ 0.86
THBS1P07996 MIR6724-4-201ENST00000617390 92 ntBASIC20.42■□□□□ 0.86
THBS1P07996 MIR6724-3-201ENST00000622482 92 ntBASIC20.42■□□□□ 0.86
THBS1P07996 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
THBS1P07996 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
THBS1P07996 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
THBS1P07996 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
THBS1P07996 C17orf82-201ENST00000623772 1530 ntBASIC20.42■□□□□ 0.86
THBS1P07996 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
THBS1P07996 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
THBS1P07996 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
THBS1P07996 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
THBS1P07996 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.41■□□□□ 0.86
THBS1P07996 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.41■□□□□ 0.86
THBS1P07996 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.41■□□□□ 0.86
THBS1P07996 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
THBS1P07996 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
THBS1P07996 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
THBS1P07996 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
THBS1P07996 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.41■□□□□ 0.86
THBS1P07996 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.41■□□□□ 0.86
THBS1P07996 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
THBS1P07996 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
THBS1P07996 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
THBS1P07996 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
THBS1P07996 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.4■□□□□ 0.86
THBS1P07996 UNC93B8-201ENST00000511903 705 ntBASIC20.4■□□□□ 0.86
THBS1P07996 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms