Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
COL5A2P05997 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC29.81■■■□□ 2.36
COL5A2P05997 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC29.81■■■□□ 2.36
COL5A2P05997 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC29.81■■■□□ 2.36
COL5A2P05997 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC29.81■■■□□ 2.36
COL5A2P05997 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC29.81■■■□□ 2.36
COL5A2P05997 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC29.81■■■□□ 2.36
COL5A2P05997 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
COL5A2P05997 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
COL5A2P05997 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC29.81■■■□□ 2.36
COL5A2P05997 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
COL5A2P05997 AC026185.1-201ENST00000445748 174 ntBASIC29.8■■■□□ 2.36
COL5A2P05997 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC29.8■■■□□ 2.36
COL5A2P05997 PPP1R14BP3-201ENST00000509033 445 ntBASIC29.8■■■□□ 2.36
COL5A2P05997 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC29.8■■■□□ 2.36
COL5A2P05997 WWOX-218ENST00000627394 894 ntTSL 5 BASIC29.8■■■□□ 2.36
COL5A2P05997 FP325331.1-202ENST00000623531 1380 ntBASIC29.8■■■□□ 2.36
COL5A2P05997 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
COL5A2P05997 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC29.8■■■□□ 2.36
COL5A2P05997 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
COL5A2P05997 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC29.79■■■□□ 2.36
COL5A2P05997 AC004854.2-201ENST00000608450 1441 ntBASIC29.79■■■□□ 2.36
COL5A2P05997 AP004607.4-201ENST00000530158 1459 ntBASIC29.79■■■□□ 2.36
COL5A2P05997 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
COL5A2P05997 CROCCP5-201ENST00000436658 830 ntBASIC29.79■■■□□ 2.36
COL5A2P05997 MAP2K4P1-201ENST00000438453 1195 ntBASIC29.79■■■□□ 2.36
COL5A2P05997 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC29.78■■■□□ 2.36
COL5A2P05997 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
COL5A2P05997 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC29.78■■■□□ 2.36
COL5A2P05997 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC29.78■■■□□ 2.36
COL5A2P05997 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
COL5A2P05997 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC29.78■■■□□ 2.36
COL5A2P05997 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
COL5A2P05997 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC29.77■■■□□ 2.36
COL5A2P05997 SHD-204ENST00000599689 1729 ntTSL 5 BASIC29.77■■■□□ 2.36
COL5A2P05997 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
COL5A2P05997 AC145676.1-201ENST00000514988 2004 ntBASIC29.77■■■□□ 2.36
COL5A2P05997 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
COL5A2P05997 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC29.77■■■□□ 2.36
COL5A2P05997 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
COL5A2P05997 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
COL5A2P05997 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC29.77■■■□□ 2.36
COL5A2P05997 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC29.77■■■□□ 2.36
COL5A2P05997 STX4-202ENST00000394998 1498 ntTSL 2 BASIC29.77■■■□□ 2.36
COL5A2P05997 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
COL5A2P05997 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC29.77■■■□□ 2.36
COL5A2P05997 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
COL5A2P05997 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC29.76■■■□□ 2.35
COL5A2P05997 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC29.76■■■□□ 2.35
COL5A2P05997 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC29.76■■■□□ 2.35
COL5A2P05997 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC29.76■■■□□ 2.35
COL5A2P05997 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC29.76■■■□□ 2.35
COL5A2P05997 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC29.76■■■□□ 2.35
COL5A2P05997 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
COL5A2P05997 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC29.76■■■□□ 2.35
COL5A2P05997 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC29.76■■■□□ 2.35
COL5A2P05997 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC29.76■■■□□ 2.35
COL5A2P05997 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
COL5A2P05997 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
COL5A2P05997 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
COL5A2P05997 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC29.75■■■□□ 2.35
COL5A2P05997 BID-214ENST00000617586 542 ntTSL 5 BASIC29.75■■■□□ 2.35
COL5A2P05997 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
COL5A2P05997 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC29.75■■■□□ 2.35
COL5A2P05997 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
COL5A2P05997 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
COL5A2P05997 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
COL5A2P05997 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
COL5A2P05997 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC29.75■■■□□ 2.35
COL5A2P05997 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC29.74■■■□□ 2.35
COL5A2P05997 COX20-201ENST00000366528 568 ntTSL 2 BASIC29.74■■■□□ 2.35
COL5A2P05997 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC29.74■■■□□ 2.35
COL5A2P05997 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC29.74■■■□□ 2.35
COL5A2P05997 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC29.74■■■□□ 2.35
COL5A2P05997 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC29.74■■■□□ 2.35
COL5A2P05997 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC29.74■■■□□ 2.35
COL5A2P05997 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC29.74■■■□□ 2.35
COL5A2P05997 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
COL5A2P05997 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
COL5A2P05997 AL355802.2-201ENST00000402069 882 ntBASIC29.74■■■□□ 2.35
COL5A2P05997 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC29.74■■■□□ 2.35
COL5A2P05997 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC29.73■■■□□ 2.35
COL5A2P05997 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
COL5A2P05997 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC29.72■■■□□ 2.35
COL5A2P05997 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC29.72■■■□□ 2.35
COL5A2P05997 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
COL5A2P05997 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
COL5A2P05997 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC29.72■■■□□ 2.35
COL5A2P05997 AC144652.1-201ENST00000609974 1624 ntBASIC29.71■■■□□ 2.35
COL5A2P05997 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC29.71■■■□□ 2.35
COL5A2P05997 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC29.71■■■□□ 2.35
COL5A2P05997 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC29.71■■■□□ 2.35
COL5A2P05997 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC29.71■■■□□ 2.35
COL5A2P05997 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC29.71■■■□□ 2.35
COL5A2P05997 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
COL5A2P05997 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC29.71■■■□□ 2.35
COL5A2P05997 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
COL5A2P05997 AC006970.2-201ENST00000450065 779 ntBASIC29.7■■■□□ 2.35
COL5A2P05997 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
COL5A2P05997 RARA-203ENST00000394086 2008 ntTSL 2 BASIC29.69■■■□□ 2.34
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms