Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 ME2-208ENST00000638937 2471 ntTSL 5 BASIC26.88■■□□□ 1.89
CHGBP05060 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CHGBP05060 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC26.88■■□□□ 1.89
CHGBP05060 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
CHGBP05060 FP325331.1-202ENST00000623531 1380 ntBASIC26.87■■□□□ 1.89
CHGBP05060 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC26.87■■□□□ 1.89
CHGBP05060 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC26.87■■□□□ 1.89
CHGBP05060 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CHGBP05060 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CHGBP05060 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC26.87■■□□□ 1.89
CHGBP05060 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC26.87■■□□□ 1.89
CHGBP05060 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CHGBP05060 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CHGBP05060 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CHGBP05060 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CHGBP05060 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CHGBP05060 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CHGBP05060 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC26.86■■□□□ 1.89
CHGBP05060 HES6-206ENST00000409574 738 ntTSL 2 BASIC26.86■■□□□ 1.89
CHGBP05060 PTMA-205ENST00000410064 814 ntTSL 2 BASIC26.86■■□□□ 1.89
CHGBP05060 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
CHGBP05060 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC26.86■■□□□ 1.89
CHGBP05060 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC26.86■■□□□ 1.89
CHGBP05060 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
CHGBP05060 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC26.85■■□□□ 1.89
CHGBP05060 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
CHGBP05060 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
CHGBP05060 DUSP8P3-201ENST00000399571 1760 ntBASIC26.85■■□□□ 1.89
CHGBP05060 AL499627.2-201ENST00000606283 725 ntBASIC26.85■■□□□ 1.89
CHGBP05060 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC26.85■■□□□ 1.89
CHGBP05060 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CHGBP05060 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
CHGBP05060 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CHGBP05060 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC26.84■■□□□ 1.89
CHGBP05060 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CHGBP05060 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC26.84■■□□□ 1.89
CHGBP05060 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC26.84■■□□□ 1.89
CHGBP05060 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CHGBP05060 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC26.84■■□□□ 1.89
CHGBP05060 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC26.83■■□□□ 1.89
CHGBP05060 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC26.83■■□□□ 1.89
CHGBP05060 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
CHGBP05060 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC26.83■■□□□ 1.89
CHGBP05060 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC26.83■■□□□ 1.89
CHGBP05060 AC005837.3-201ENST00000612163 286 ntBASIC26.83■■□□□ 1.89
CHGBP05060 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CHGBP05060 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
CHGBP05060 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
CHGBP05060 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.88
CHGBP05060 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CHGBP05060 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC26.82■■□□□ 1.88
CHGBP05060 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC26.82■■□□□ 1.88
CHGBP05060 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CHGBP05060 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CHGBP05060 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
CHGBP05060 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
CHGBP05060 AC010525.1-201ENST00000585559 441 ntBASIC26.82■■□□□ 1.88
CHGBP05060 SF1-220ENST00000626028 704 ntTSL 2 BASIC26.82■■□□□ 1.88
CHGBP05060 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC26.82■■□□□ 1.88
CHGBP05060 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC26.82■■□□□ 1.88
CHGBP05060 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC26.82■■□□□ 1.88
CHGBP05060 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CHGBP05060 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC26.82■■□□□ 1.88
CHGBP05060 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC26.81■■□□□ 1.88
CHGBP05060 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC26.81■■□□□ 1.88
CHGBP05060 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC26.81■■□□□ 1.88
CHGBP05060 AC133637.1-201ENST00000624115 1537 ntBASIC26.81■■□□□ 1.88
CHGBP05060 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC26.81■■□□□ 1.88
CHGBP05060 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC26.81■■□□□ 1.88
CHGBP05060 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC26.81■■□□□ 1.88
CHGBP05060 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
CHGBP05060 SUDS3P1-201ENST00000505831 966 ntBASIC26.81■■□□□ 1.88
CHGBP05060 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC26.81■■□□□ 1.88
CHGBP05060 DUX4L19-201ENST00000557448 1267 ntBASIC26.81■■□□□ 1.88
CHGBP05060 MAG-206ENST00000597035 542 ntTSL 4 BASIC26.81■■□□□ 1.88
CHGBP05060 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CHGBP05060 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC26.81■■□□□ 1.88
CHGBP05060 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC26.81■■□□□ 1.88
CHGBP05060 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
CHGBP05060 AC004687.1-201ENST00000579003 1625 ntBASIC26.8■■□□□ 1.88
CHGBP05060 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CHGBP05060 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC26.8■■□□□ 1.88
CHGBP05060 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC26.8■■□□□ 1.88
CHGBP05060 AC011298.3-201ENST00000615796 283 ntBASIC26.8■■□□□ 1.88
CHGBP05060 AC136469.2-201ENST00000623944 1028 ntBASIC26.8■■□□□ 1.88
CHGBP05060 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC26.8■■□□□ 1.88
CHGBP05060 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CHGBP05060 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CHGBP05060 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC26.8■■□□□ 1.88
CHGBP05060 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CHGBP05060 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CHGBP05060 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
CHGBP05060 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC26.79■■□□□ 1.88
CHGBP05060 AC092171.4-201ENST00000609130 632 ntBASIC26.79■■□□□ 1.88
CHGBP05060 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC26.79■■□□□ 1.88
CHGBP05060 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC26.79■■□□□ 1.88
CHGBP05060 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CHGBP05060 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC26.79■■□□□ 1.88
CHGBP05060 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC26.79■■□□□ 1.88
CHGBP05060 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC26.79■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms