Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
P04436 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.33■□□□□ 0.85
P04436 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
P04436 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.33■□□□□ 0.84
P04436 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
P04436 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
P04436 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
P04436 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
P04436 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
P04436 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
P04436 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
P04436 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.32■□□□□ 0.84
P04436 ZNRF2P3-201ENST00000424200 374 ntBASIC20.32■□□□□ 0.84
P04436 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.32■□□□□ 0.84
P04436 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.32■□□□□ 0.84
P04436 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
P04436 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.32■□□□□ 0.84
P04436 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
P04436 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
P04436 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
P04436 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
P04436 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
P04436 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
P04436 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
P04436 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.31■□□□□ 0.84
P04436 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
P04436 SLC47A1P1-202ENST00000449666 945 ntBASIC20.31■□□□□ 0.84
P04436 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.31■□□□□ 0.84
P04436 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.31■□□□□ 0.84
P04436 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
P04436 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
P04436 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
P04436 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
P04436 AL353803.4-201ENST00000565882 1934 ntBASIC20.31■□□□□ 0.84
P04436 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
P04436 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
P04436 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.3■□□□□ 0.84
P04436 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
P04436 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
P04436 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.3■□□□□ 0.84
P04436 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.3■□□□□ 0.84
P04436 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.3■□□□□ 0.84
P04436 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.3■□□□□ 0.84
P04436 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.3■□□□□ 0.84
P04436 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
P04436 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
P04436 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
P04436 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
P04436 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
P04436 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
P04436 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.3■□□□□ 0.84
P04436 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
P04436 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
P04436 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
P04436 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
P04436 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
P04436 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
P04436 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
P04436 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.29■□□□□ 0.84
P04436 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
P04436 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
P04436 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
P04436 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
P04436 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.28■□□□□ 0.84
P04436 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.28■□□□□ 0.84
P04436 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
P04436 OR2I1P-207ENST00000453522 948 ntBASIC20.28■□□□□ 0.84
P04436 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.28■□□□□ 0.84
P04436 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
P04436 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.28■□□□□ 0.84
P04436 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.28■□□□□ 0.84
P04436 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.27■□□□□ 0.84
P04436 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
P04436 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
P04436 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
P04436 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
P04436 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
P04436 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.27■□□□□ 0.84
P04436 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.27■□□□□ 0.84
P04436 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
P04436 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
P04436 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.26■□□□□ 0.83
P04436 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
P04436 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
P04436 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
P04436 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
P04436 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
P04436 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
P04436 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
P04436 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
P04436 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
P04436 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.25■□□□□ 0.83
P04436 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
P04436 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.25■□□□□ 0.83
P04436 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
P04436 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
P04436 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
P04436 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.24■□□□□ 0.83
P04436 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
P04436 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms