Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
P04436 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.33■□□□□ 0.85
P04436 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
P04436 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.33■□□□□ 0.84
P04436 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
P04436 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
P04436 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
P04436 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
P04436 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
P04436 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
P04436 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
P04436 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.32■□□□□ 0.84
P04436 ZNRF2P3-201ENST00000424200 374 ntBASIC20.32■□□□□ 0.84
P04436 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.32■□□□□ 0.84
P04436 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.32■□□□□ 0.84
P04436 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
P04436 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.32■□□□□ 0.84
P04436 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
P04436 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
P04436 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
P04436 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
P04436 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
P04436 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
P04436 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
P04436 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.31■□□□□ 0.84
P04436 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
P04436 SLC47A1P1-202ENST00000449666 945 ntBASIC20.31■□□□□ 0.84
P04436 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.31■□□□□ 0.84
P04436 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.31■□□□□ 0.84
P04436 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
P04436 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
P04436 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
P04436 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
P04436 AL353803.4-201ENST00000565882 1934 ntBASIC20.31■□□□□ 0.84
P04436 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
P04436 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
P04436 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.3■□□□□ 0.84
P04436 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
P04436 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
P04436 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.3■□□□□ 0.84
P04436 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.3■□□□□ 0.84
P04436 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.3■□□□□ 0.84
P04436 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.3■□□□□ 0.84
P04436 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.3■□□□□ 0.84
P04436 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
P04436 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
P04436 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
P04436 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
P04436 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
P04436 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
P04436 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.3■□□□□ 0.84
P04436 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
P04436 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
P04436 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
P04436 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
P04436 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
P04436 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
P04436 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
P04436 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.29■□□□□ 0.84
P04436 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
P04436 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
P04436 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
P04436 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
P04436 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.28■□□□□ 0.84
P04436 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.28■□□□□ 0.84
P04436 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
P04436 OR2I1P-207ENST00000453522 948 ntBASIC20.28■□□□□ 0.84
P04436 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.28■□□□□ 0.84
P04436 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
P04436 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.28■□□□□ 0.84
P04436 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.28■□□□□ 0.84
P04436 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.27■□□□□ 0.84
P04436 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
P04436 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
P04436 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
P04436 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
P04436 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
P04436 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.27■□□□□ 0.84
P04436 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.27■□□□□ 0.84
P04436 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
P04436 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
P04436 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.26■□□□□ 0.83
P04436 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
P04436 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
P04436 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
P04436 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
P04436 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
P04436 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
P04436 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
P04436 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
P04436 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
P04436 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.25■□□□□ 0.83
P04436 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
P04436 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.25■□□□□ 0.83
P04436 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
P04436 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
P04436 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
P04436 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.24■□□□□ 0.83
P04436 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
P04436 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms