Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
APOA1P02647 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.76■□□□□ 0.75
APOA1P02647 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
APOA1P02647 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
APOA1P02647 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.75■□□□□ 0.75
APOA1P02647 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
APOA1P02647 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
APOA1P02647 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
APOA1P02647 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
APOA1P02647 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.75■□□□□ 0.75
APOA1P02647 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
APOA1P02647 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
APOA1P02647 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
APOA1P02647 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
APOA1P02647 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.75■□□□□ 0.75
APOA1P02647 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.75■□□□□ 0.75
APOA1P02647 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
APOA1P02647 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
APOA1P02647 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
APOA1P02647 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
APOA1P02647 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
APOA1P02647 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
APOA1P02647 C11orf96-202ENST00000528572 1834 ntBASIC19.74■□□□□ 0.75
APOA1P02647 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
APOA1P02647 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.74■□□□□ 0.75
APOA1P02647 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
APOA1P02647 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
APOA1P02647 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
APOA1P02647 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
APOA1P02647 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
APOA1P02647 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.74■□□□□ 0.75
APOA1P02647 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.74■□□□□ 0.75
APOA1P02647 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
APOA1P02647 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
APOA1P02647 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.74■□□□□ 0.75
APOA1P02647 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.74■□□□□ 0.75
APOA1P02647 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
APOA1P02647 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
APOA1P02647 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
APOA1P02647 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.73■□□□□ 0.75
APOA1P02647 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
APOA1P02647 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
APOA1P02647 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
APOA1P02647 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
APOA1P02647 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
APOA1P02647 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
APOA1P02647 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
APOA1P02647 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
APOA1P02647 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
APOA1P02647 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
APOA1P02647 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
APOA1P02647 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
APOA1P02647 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
APOA1P02647 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
APOA1P02647 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
APOA1P02647 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC19.72■□□□□ 0.75
APOA1P02647 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
APOA1P02647 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
APOA1P02647 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
APOA1P02647 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
APOA1P02647 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.71■□□□□ 0.75
APOA1P02647 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
APOA1P02647 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
APOA1P02647 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
APOA1P02647 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
APOA1P02647 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.71■□□□□ 0.75
APOA1P02647 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
APOA1P02647 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.71■□□□□ 0.75
APOA1P02647 FBXW4P1-201ENST00000426721 2239 ntBASIC19.71■□□□□ 0.75
APOA1P02647 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.71■□□□□ 0.75
APOA1P02647 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.71■□□□□ 0.75
APOA1P02647 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
APOA1P02647 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.71■□□□□ 0.75
APOA1P02647 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
APOA1P02647 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
APOA1P02647 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
APOA1P02647 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
APOA1P02647 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
APOA1P02647 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
APOA1P02647 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
APOA1P02647 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
APOA1P02647 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.71■□□□□ 0.75
APOA1P02647 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
APOA1P02647 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
APOA1P02647 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
APOA1P02647 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
APOA1P02647 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
APOA1P02647 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC19.7■□□□□ 0.74
APOA1P02647 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.7■□□□□ 0.74
APOA1P02647 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
APOA1P02647 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
APOA1P02647 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.7■□□□□ 0.74
APOA1P02647 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
APOA1P02647 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
APOA1P02647 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
APOA1P02647 AC092053.2-201ENST00000640557 1818 ntBASIC19.69■□□□□ 0.74
APOA1P02647 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
APOA1P02647 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
APOA1P02647 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
APOA1P02647 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms