Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
TRBC1P01850 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
TRBC1P01850 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
TRBC1P01850 HES6-206ENST00000409574 738 ntTSL 2 BASIC22.32■■□□□ 1.16
TRBC1P01850 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TRBC1P01850 AL136162.1-201ENST00000607711 1078 ntBASIC22.32■■□□□ 1.16
TRBC1P01850 AC011298.3-201ENST00000615796 283 ntBASIC22.32■■□□□ 1.16
TRBC1P01850 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TRBC1P01850 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
TRBC1P01850 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.32■■□□□ 1.16
TRBC1P01850 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
TRBC1P01850 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.32■■□□□ 1.16
TRBC1P01850 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC22.31■■□□□ 1.16
TRBC1P01850 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
TRBC1P01850 DUSP8P5-201ENST00000422884 1815 ntBASIC22.31■■□□□ 1.16
TRBC1P01850 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
TRBC1P01850 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TRBC1P01850 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TRBC1P01850 AL139246.5-201ENST00000606645 996 ntBASIC22.31■■□□□ 1.16
TRBC1P01850 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
TRBC1P01850 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TRBC1P01850 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TRBC1P01850 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC22.3■■□□□ 1.16
TRBC1P01850 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC22.3■■□□□ 1.16
TRBC1P01850 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
TRBC1P01850 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC22.3■■□□□ 1.16
TRBC1P01850 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TRBC1P01850 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC22.3■■□□□ 1.16
TRBC1P01850 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC22.3■■□□□ 1.16
TRBC1P01850 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC22.3■■□□□ 1.16
TRBC1P01850 AC024257.2-201ENST00000549699 147 ntBASIC22.3■■□□□ 1.16
TRBC1P01850 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC22.3■■□□□ 1.16
TRBC1P01850 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TRBC1P01850 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
TRBC1P01850 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC22.3■■□□□ 1.16
TRBC1P01850 AC135279.3-201ENST00000610945 1311 ntBASIC22.3■■□□□ 1.16
TRBC1P01850 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.29■■□□□ 1.16
TRBC1P01850 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TRBC1P01850 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
TRBC1P01850 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
TRBC1P01850 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC22.29■■□□□ 1.16
TRBC1P01850 AC133637.1-201ENST00000624115 1537 ntBASIC22.29■■□□□ 1.16
TRBC1P01850 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TRBC1P01850 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
TRBC1P01850 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TRBC1P01850 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TRBC1P01850 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TRBC1P01850 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
TRBC1P01850 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TRBC1P01850 PBX2P1-201ENST00000493219 1291 ntBASIC22.28■■□□□ 1.16
TRBC1P01850 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC22.28■■□□□ 1.16
TRBC1P01850 AC106739.1-201ENST00000617035 715 ntBASIC22.28■■□□□ 1.16
TRBC1P01850 AC136469.2-201ENST00000623944 1028 ntBASIC22.28■■□□□ 1.16
TRBC1P01850 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC22.28■■□□□ 1.16
TRBC1P01850 CASK-201ENST00000378154 2494 ntTSL 5 BASIC22.28■■□□□ 1.16
TRBC1P01850 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC22.27■■□□□ 1.16
TRBC1P01850 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC22.27■■□□□ 1.16
TRBC1P01850 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
TRBC1P01850 MTURN-203ENST00000409688 843 ntTSL 2 BASIC22.27■■□□□ 1.16
TRBC1P01850 PTMA-205ENST00000410064 814 ntTSL 2 BASIC22.27■■□□□ 1.16
TRBC1P01850 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
TRBC1P01850 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
TRBC1P01850 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC22.27■■□□□ 1.16
TRBC1P01850 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC22.27■■□□□ 1.16
TRBC1P01850 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TRBC1P01850 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
TRBC1P01850 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TRBC1P01850 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
TRBC1P01850 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
TRBC1P01850 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRBC1P01850 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRBC1P01850 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRBC1P01850 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRBC1P01850 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRBC1P01850 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC22.26■■□□□ 1.15
TRBC1P01850 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
TRBC1P01850 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC22.26■■□□□ 1.15
TRBC1P01850 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC22.26■■□□□ 1.15
TRBC1P01850 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
TRBC1P01850 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
TRBC1P01850 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.26■■□□□ 1.15
TRBC1P01850 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC22.26■■□□□ 1.15
TRBC1P01850 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRBC1P01850 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRBC1P01850 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TRBC1P01850 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRBC1P01850 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRBC1P01850 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRBC1P01850 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRBC1P01850 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TRBC1P01850 RALB-208ENST00000631312 311 ntTSL 5 BASIC22.25■■□□□ 1.15
TRBC1P01850 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRBC1P01850 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
TRBC1P01850 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC22.25■■□□□ 1.15
TRBC1P01850 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
TRBC1P01850 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
TRBC1P01850 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC22.24■■□□□ 1.15
TRBC1P01850 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TRBC1P01850 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TRBC1P01850 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms