Protein–RNA interactions for Protein: O75940

SMNDC1, Survival of motor neuron-related-splicing factor 30, humanhuman

Known RBP eCLIP

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1O75940 EEF1D-252ENST00000534377 617 ntTSL 213.3□□□□□ -0.283e-7■■■■□ 21.7
SMNDC1O75940 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.353e-7■■■■□ 21.7
SMNDC1O75940 EEF1D-247ENST00000533204 842 ntTSL 212.39□□□□□ -0.433e-7■■■■□ 21.7
SMNDC1O75940 EEF1D-236ENST00000531218 787 ntTSL 312.13□□□□□ -0.473e-7■■■■□ 21.7
SMNDC1O75940 EEF1D-253ENST00000534380 1001 ntTSL 512.13□□□□□ -0.473e-7■■■■□ 21.7
SMNDC1O75940 EEF1D-215ENST00000526340 770 ntTSL 312.02□□□□□ -0.493e-7■■■■□ 21.7
SMNDC1O75940 EEF1D-248ENST00000533494 758 ntTSL 511.44□□□□□ -0.583e-7■■■■□ 21.7
SMNDC1O75940 EEF1D-226ENST00000529516 473 ntTSL 38.14□□□□□ -1.113e-7■■■■□ 21.7
SMNDC1O75940 NADK-216ENST00000497747 467 ntTSL 214.85□□□□□ -0.036e-6■■■■□ 21.7
SMNDC1O75940 NADK-215ENST00000497615 534 ntTSL 213.55□□□□□ -0.246e-6■■■■□ 21.7
SMNDC1O75940 NADK-211ENST00000489538 475 ntTSL 312.28□□□□□ -0.446e-6■■■■□ 21.7
SMNDC1O75940 NADK-209ENST00000480499 549 ntTSL 211.98□□□□□ -0.496e-6■■■■□ 21.7
SMNDC1O75940 MATR3-239ENST00000514694 587 ntTSL 413.71□□□□□ -0.213e-24■■■■□ 21.7
SMNDC1O75940 SNHG4-203ENST00000506188 801 ntTSL 412.65□□□□□ -0.383e-24■■■■□ 21.7
SMNDC1O75940 SNHG4-201ENST00000448190 542 ntTSL 411.96□□□□□ -0.493e-24■■■■□ 21.7
SMNDC1O75940 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC11.62□□□□□ -0.553e-24■■■■□ 21.7
SMNDC1O75940 SNHG4-206ENST00000508735 310 ntTSL 1 (best)11.02□□□□□ -0.653e-24■■■■□ 21.7
SMNDC1O75940 SNHG4-208ENST00000514110 679 ntTSL 1 (best)11.02□□□□□ -0.653e-24■■■■□ 21.7
SMNDC1O75940 MATR3-234ENST00000505016 664 ntTSL 211.02□□□□□ -0.653e-24■■■■□ 21.7
SMNDC1O75940 SNHG4-202ENST00000505522 629 ntTSL 1 (best)11.02□□□□□ -0.653e-24■■■■□ 21.7
SMNDC1O75940 MATR3-231ENST00000502394 589 ntTSL 410.8□□□□□ -0.683e-24■■■■□ 21.7
SMNDC1O75940 SNHG4-207ENST00000513259 444 ntTSL 58.04□□□□□ -1.123e-24■■■■□ 21.7
SMNDC1O75940 SNHG4-205ENST00000507692 575 ntTSL 54.5□□□□□ -1.693e-24■■■■□ 21.7
SMNDC1O75940 CBFA2T3-211ENST00000570046 284 ntTSL 38.71□□□□□ -1.022e-6■■■■□ 21.7
SMNDC1O75940 RANBP10-208ENST00000602887 683 ntTSL 323.18■■□□□ 1.34e-6■■■■□ 21.7
SMNDC1O75940 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC23.16■■□□□ 1.34e-6■■■■□ 21.7
SMNDC1O75940 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC23.05■■□□□ 1.284e-6■■■■□ 21.7
SMNDC1O75940 RANBP10-205ENST00000602638 1248 ntTSL 222.97■■□□□ 1.274e-6■■■■□ 21.7
SMNDC1O75940 RANBP10-207ENST00000602815 577 ntTSL 422.97■■□□□ 1.274e-6■■■■□ 21.7
SMNDC1O75940 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC22.39■■□□□ 1.184e-6■■■■□ 21.7
SMNDC1O75940 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.964e-6■■■■□ 21.7
SMNDC1O75940 HEXDC-215ENST00000585077 1139 ntTSL 220.76■□□□□ 0.914e-6■■■■□ 21.7
SMNDC1O75940 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.914e-6■■■■□ 21.7
SMNDC1O75940 YIPF2-206ENST00000588347 753 ntTSL 220.05■□□□□ 0.84e-6■■■■□ 21.7
SMNDC1O75940 HEXDC-212ENST00000582429 1824 ntTSL 220.04■□□□□ 0.84e-6■■■■□ 21.7
SMNDC1O75940 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.57■□□□□ 0.724e-6■■■■□ 21.7
SMNDC1O75940 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.73■□□□□ 0.594e-6■■■■□ 21.7
SMNDC1O75940 RANBP10-203ENST00000602506 2756 ntTSL 218.51■□□□□ 0.554e-6■■■■□ 21.7
SMNDC1O75940 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.544e-6■■■■□ 21.7
SMNDC1O75940 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.544e-6■■■■□ 21.7
SMNDC1O75940 YIPF2-208ENST00000589971 879 ntTSL 218.41■□□□□ 0.544e-6■■■■□ 21.7
SMNDC1O75940 NSUN5P1-201ENST00000393633 4792 ntTSL 218.29■□□□□ 0.524e-6■■■■□ 21.7
SMNDC1O75940 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.26■□□□□ 0.514e-6■■■■□ 21.7
SMNDC1O75940 YIPF2-203ENST00000586575 932 ntTSL 517.98■□□□□ 0.474e-6■■■■□ 21.7
SMNDC1O75940 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.444e-6■■■■□ 21.7
SMNDC1O75940 DNM1-210ENST00000625457 333 ntTSL 217.74■□□□□ 0.434e-6■■■■□ 21.7
SMNDC1O75940 ADCY7-215ENST00000570187 1320 ntTSL 217.7■□□□□ 0.424e-6■■■■□ 21.7
SMNDC1O75940 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.66■□□□□ 0.424e-6■■■■□ 21.7
SMNDC1O75940 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.54■□□□□ 0.44e-6■■■■□ 21.7
SMNDC1O75940 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.44e-6■■■■□ 21.7
SMNDC1O75940 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.394e-6■■■■□ 21.7
SMNDC1O75940 ADCY7-210ENST00000567277 2304 ntTSL 1 (best)17.23■□□□□ 0.354e-6■■■■□ 21.7
SMNDC1O75940 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.334e-6■■■■□ 21.7
SMNDC1O75940 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.66■□□□□ 0.264e-6■■■■□ 21.7
SMNDC1O75940 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.254e-6■■■■□ 21.7
SMNDC1O75940 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.194e-6■■■■□ 21.7
SMNDC1O75940 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.12■□□□□ 0.174e-6■■■■□ 21.7
SMNDC1O75940 YIPF2-212ENST00000592646 950 ntTSL 316.12■□□□□ 0.174e-6■■■■□ 21.7
SMNDC1O75940 YIPF2-202ENST00000585858 656 ntTSL 316.12■□□□□ 0.174e-6■■■■□ 21.7
SMNDC1O75940 YIPF2-207ENST00000588962 788 ntTSL 216.12■□□□□ 0.174e-6■■■■□ 21.7
SMNDC1O75940 NSUN5P1-202ENST00000421140 1535 ntBASIC16.03■□□□□ 0.164e-6■■■■□ 21.7
SMNDC1O75940 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.164e-6■■■■□ 21.7
SMNDC1O75940 YIPF2-205ENST00000587943 796 ntTSL 515.93■□□□□ 0.144e-6■■■■□ 21.7
SMNDC1O75940 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.124e-6■■■■□ 21.7
SMNDC1O75940 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.124e-6■■■■□ 21.7
SMNDC1O75940 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC15.71■□□□□ 0.114e-6■■■■□ 21.7
SMNDC1O75940 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC15.28■□□□□ 0.044e-6■■■■□ 21.7
SMNDC1O75940 HEXDC-204ENST00000578130 853 ntTSL 215.06■□□□□ 04e-6■■■■□ 21.7
SMNDC1O75940 SLC6A8-203ENST00000429147 334 ntTSL 214.96□□□□□ -0.012e-11■■■■□ 21.7
SMNDC1O75940 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.054e-6■■■■□ 21.7
SMNDC1O75940 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.51□□□□□ -0.094e-6■■■■□ 21.7
SMNDC1O75940 DNM1-214ENST00000630850 3442 ntTSL 214.44□□□□□ -0.14e-6■■■■□ 21.7
SMNDC1O75940 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.14e-6■■■■□ 21.7
SMNDC1O75940 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.36□□□□□ -0.114e-6■■■■□ 21.7
SMNDC1O75940 UAP1L1-201ENST00000360271 3201 ntTSL 2 BASIC14.08□□□□□ -0.164e-6■■■■□ 21.7
SMNDC1O75940 DRD4-202ENST00000528733 361 ntTSL 313.95□□□□□ -0.184e-6■■■■□ 21.7
SMNDC1O75940 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.184e-6■■■■□ 21.7
SMNDC1O75940 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.224e-6■■■■□ 21.7
SMNDC1O75940 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.66□□□□□ -0.224e-6■■■■□ 21.7
SMNDC1O75940 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.55□□□□□ -0.244e-6■■■■□ 21.7
SMNDC1O75940 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.254e-6■■■■□ 21.7
SMNDC1O75940 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC13.45□□□□□ -0.264e-6■■■■□ 21.7
SMNDC1O75940 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.264e-6■■■■□ 21.7
SMNDC1O75940 CCT8-201ENST00000286788 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.34e-6■■■■□ 21.7
SMNDC1O75940 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.324e-6■■■■□ 21.7
SMNDC1O75940 UAP1L1-203ENST00000474787 4412 ntTSL 212.95□□□□□ -0.344e-6■■■■□ 21.7
SMNDC1O75940 NPTN-209ENST00000565325 858 ntTSL 212.86□□□□□ -0.354e-6■■■■□ 21.7
SMNDC1O75940 ATAD2-201ENST00000287394 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.388e-9■■■■□ 21.7
SMNDC1O75940 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC12.44□□□□□ -0.424e-6■■■■□ 21.7
SMNDC1O75940 CLCC1-207ENST00000369976 2468 ntTSL 2 BASIC12.35□□□□□ -0.434e-6■■■■□ 21.7
SMNDC1O75940 ATAD2-202ENST00000517666 4995 ntTSL 512.31□□□□□ -0.448e-9■■■■□ 21.7
SMNDC1O75940 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC12.29□□□□□ -0.444e-6■■■■□ 21.7
SMNDC1O75940 HEXDC-205ENST00000578616 862 ntTSL 312.09□□□□□ -0.474e-6■■■■□ 21.7
SMNDC1O75940 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC11.95□□□□□ -0.54e-6■■■■□ 21.7
SMNDC1O75940 CCT8-211ENST00000540844 1927 ntTSL 2 BASIC11.93□□□□□ -0.54e-6■■■■□ 21.7
SMNDC1O75940 NUP62CL-204ENST00000484614 1515 ntTSL 211.65□□□□□ -0.544e-6■■■■□ 21.7
SMNDC1O75940 NPTN-205ENST00000563691 1214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.614e-6■■■■□ 21.7
SMNDC1O75940 CCT8-208ENST00000484403 808 ntTSL 310.81□□□□□ -0.684e-6■■■■□ 21.7
SMNDC1O75940 ATAD2-204ENST00000521496 3133 ntTSL 1 (best)10.81□□□□□ -0.688e-9■■■■□ 21.7
SMNDC1O75940 RANBP10-204ENST00000602525 1353 ntTSL 210.75□□□□□ -0.694e-6■■■■□ 21.7
Retrieved 100 of 11,362 protein–RNA pairs in 298.7 ms