Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CPNE3O75131 LINC00543-201ENST00000567234 1845 ntBASIC21.25■□□□□ 0.99
CPNE3O75131 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CPNE3O75131 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.25■□□□□ 0.99
CPNE3O75131 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.25■□□□□ 0.99
CPNE3O75131 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.25■□□□□ 0.99
CPNE3O75131 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
CPNE3O75131 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CPNE3O75131 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CPNE3O75131 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.24■□□□□ 0.99
CPNE3O75131 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.24■□□□□ 0.99
CPNE3O75131 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.24■□□□□ 0.99
CPNE3O75131 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CPNE3O75131 IRS3P-201ENST00000223076 1006 ntBASIC21.24■□□□□ 0.99
CPNE3O75131 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CPNE3O75131 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.24■□□□□ 0.99
CPNE3O75131 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CPNE3O75131 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.24■□□□□ 0.99
CPNE3O75131 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CPNE3O75131 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.23■□□□□ 0.99
CPNE3O75131 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CPNE3O75131 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CPNE3O75131 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CPNE3O75131 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CPNE3O75131 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.23■□□□□ 0.99
CPNE3O75131 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.23■□□□□ 0.99
CPNE3O75131 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CPNE3O75131 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CPNE3O75131 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CPNE3O75131 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CPNE3O75131 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
CPNE3O75131 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.22■□□□□ 0.99
CPNE3O75131 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.22■□□□□ 0.99
CPNE3O75131 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.22■□□□□ 0.99
CPNE3O75131 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CPNE3O75131 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.22■□□□□ 0.99
CPNE3O75131 AC126544.1-201ENST00000580842 1059 ntBASIC21.22■□□□□ 0.99
CPNE3O75131 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CPNE3O75131 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.22■□□□□ 0.99
CPNE3O75131 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CPNE3O75131 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CPNE3O75131 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CPNE3O75131 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CPNE3O75131 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CPNE3O75131 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
CPNE3O75131 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CPNE3O75131 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.21■□□□□ 0.99
CPNE3O75131 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.21■□□□□ 0.99
CPNE3O75131 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CPNE3O75131 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
CPNE3O75131 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CPNE3O75131 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.21■□□□□ 0.99
CPNE3O75131 FP325331.1-202ENST00000623531 1380 ntBASIC21.21■□□□□ 0.99
CPNE3O75131 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
CPNE3O75131 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CPNE3O75131 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CPNE3O75131 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CPNE3O75131 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CPNE3O75131 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CPNE3O75131 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CPNE3O75131 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.2■□□□□ 0.98
CPNE3O75131 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CPNE3O75131 AC133637.1-201ENST00000624115 1537 ntBASIC21.19■□□□□ 0.98
CPNE3O75131 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CPNE3O75131 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CPNE3O75131 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CPNE3O75131 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.19■□□□□ 0.98
CPNE3O75131 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
CPNE3O75131 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CPNE3O75131 SLC47A1P1-202ENST00000449666 945 ntBASIC21.19■□□□□ 0.98
CPNE3O75131 MIR6821-201ENST00000617625 74 ntBASIC21.19■□□□□ 0.98
CPNE3O75131 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CPNE3O75131 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CPNE3O75131 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CPNE3O75131 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CPNE3O75131 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPNE3O75131 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.18■□□□□ 0.98
CPNE3O75131 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPNE3O75131 AC097381.1-201ENST00000429019 1296 ntBASIC21.18■□□□□ 0.98
CPNE3O75131 DUX4L4-201ENST00000566884 1269 ntBASIC21.18■□□□□ 0.98
CPNE3O75131 AL499627.2-201ENST00000606283 725 ntBASIC21.18■□□□□ 0.98
CPNE3O75131 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.18■□□□□ 0.98
CPNE3O75131 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CPNE3O75131 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPNE3O75131 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPNE3O75131 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CPNE3O75131 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CPNE3O75131 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.17■□□□□ 0.98
CPNE3O75131 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.17■□□□□ 0.98
CPNE3O75131 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.17■□□□□ 0.98
CPNE3O75131 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.17■□□□□ 0.98
CPNE3O75131 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CPNE3O75131 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.17■□□□□ 0.98
CPNE3O75131 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.17■□□□□ 0.98
CPNE3O75131 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
CPNE3O75131 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.17■□□□□ 0.98
CPNE3O75131 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.16■□□□□ 0.98
CPNE3O75131 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CPNE3O75131 AC144652.1-201ENST00000609974 1624 ntBASIC21.16■□□□□ 0.98
CPNE3O75131 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms