Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC24.81■■□□□ 1.56
TNRC18O15417 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC24.8■■□□□ 1.56
TNRC18O15417 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC24.8■■□□□ 1.56
TNRC18O15417 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC24.8■■□□□ 1.56
TNRC18O15417 AC133552.2-202ENST00000575694 574 ntBASIC24.8■■□□□ 1.56
TNRC18O15417 AC010525.1-201ENST00000585559 441 ntBASIC24.8■■□□□ 1.56
TNRC18O15417 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
TNRC18O15417 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC24.8■■□□□ 1.56
TNRC18O15417 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
TNRC18O15417 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC24.8■■□□□ 1.56
TNRC18O15417 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
TNRC18O15417 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC24.79■■□□□ 1.56
TNRC18O15417 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC24.79■■□□□ 1.56
TNRC18O15417 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC24.79■■□□□ 1.56
TNRC18O15417 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC24.79■■□□□ 1.56
TNRC18O15417 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
TNRC18O15417 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
TNRC18O15417 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC24.78■■□□□ 1.56
TNRC18O15417 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC24.78■■□□□ 1.56
TNRC18O15417 CNN2P6-201ENST00000439038 900 ntBASIC24.78■■□□□ 1.56
TNRC18O15417 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
TNRC18O15417 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC24.78■■□□□ 1.56
TNRC18O15417 AC105036.2-201ENST00000569468 176 ntBASIC24.78■■□□□ 1.56
TNRC18O15417 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
TNRC18O15417 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC24.78■■□□□ 1.56
TNRC18O15417 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
TNRC18O15417 MFF-208ENST00000409616 1247 ntTSL 5 BASIC24.78■■□□□ 1.56
TNRC18O15417 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
TNRC18O15417 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
TNRC18O15417 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
TNRC18O15417 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
TNRC18O15417 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
TNRC18O15417 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC24.77■■□□□ 1.56
TNRC18O15417 AC133637.1-201ENST00000624115 1537 ntBASIC24.77■■□□□ 1.56
TNRC18O15417 LINC01003-201ENST00000564834 1764 ntBASIC24.77■■□□□ 1.56
TNRC18O15417 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
TNRC18O15417 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC24.77■■□□□ 1.56
TNRC18O15417 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC24.77■■□□□ 1.56
TNRC18O15417 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC24.77■■□□□ 1.56
TNRC18O15417 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC24.76■■□□□ 1.55
TNRC18O15417 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
TNRC18O15417 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC24.76■■□□□ 1.55
TNRC18O15417 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC24.76■■□□□ 1.55
TNRC18O15417 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC24.76■■□□□ 1.55
TNRC18O15417 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC24.76■■□□□ 1.55
TNRC18O15417 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC24.76■■□□□ 1.55
TNRC18O15417 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
TNRC18O15417 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC24.75■■□□□ 1.55
TNRC18O15417 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
TNRC18O15417 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
TNRC18O15417 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
TNRC18O15417 RCN1P1-201ENST00000400413 996 ntBASIC24.75■■□□□ 1.55
TNRC18O15417 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
TNRC18O15417 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC24.75■■□□□ 1.55
TNRC18O15417 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
TNRC18O15417 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC24.75■■□□□ 1.55
TNRC18O15417 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
TNRC18O15417 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC24.75■■□□□ 1.55
TNRC18O15417 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
TNRC18O15417 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC24.74■■□□□ 1.55
TNRC18O15417 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
TNRC18O15417 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
TNRC18O15417 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
TNRC18O15417 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC24.74■■□□□ 1.55
TNRC18O15417 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
TNRC18O15417 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC24.73■■□□□ 1.55
TNRC18O15417 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
TNRC18O15417 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC24.73■■□□□ 1.55
TNRC18O15417 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC24.73■■□□□ 1.55
TNRC18O15417 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
TNRC18O15417 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
TNRC18O15417 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC24.72■■□□□ 1.55
TNRC18O15417 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
TNRC18O15417 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
TNRC18O15417 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
TNRC18O15417 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
TNRC18O15417 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
TNRC18O15417 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
TNRC18O15417 ESRRAP1-201ENST00000400596 1257 ntBASIC24.72■■□□□ 1.55
TNRC18O15417 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
TNRC18O15417 MIR4758-201ENST00000577688 71 ntBASIC24.72■■□□□ 1.55
TNRC18O15417 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC24.72■■□□□ 1.55
TNRC18O15417 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
TNRC18O15417 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
TNRC18O15417 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC24.71■■□□□ 1.55
TNRC18O15417 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC24.71■■□□□ 1.55
TNRC18O15417 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
TNRC18O15417 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.55
TNRC18O15417 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
TNRC18O15417 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
TNRC18O15417 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC24.7■■□□□ 1.55
TNRC18O15417 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
TNRC18O15417 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.55
TNRC18O15417 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
TNRC18O15417 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
TNRC18O15417 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
TNRC18O15417 TESC-206ENST00000541210 936 ntTSL 3 BASIC24.7■■□□□ 1.54
TNRC18O15417 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC24.7■■□□□ 1.54
TNRC18O15417 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
TNRC18O15417 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms