Protein–RNA interactions for Protein: O15230

LAMA5, Laminin subunit alpha-5, humanhuman

Predictions only

Length 3,695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA5O15230 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LAMA5O15230 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.93■□□□□ 0.94
LAMA5O15230 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.93■□□□□ 0.94
LAMA5O15230 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LAMA5O15230 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LAMA5O15230 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
LAMA5O15230 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
LAMA5O15230 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LAMA5O15230 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LAMA5O15230 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LAMA5O15230 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LAMA5O15230 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LAMA5O15230 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LAMA5O15230 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LAMA5O15230 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LAMA5O15230 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.92■□□□□ 0.94
LAMA5O15230 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
LAMA5O15230 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LAMA5O15230 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.92■□□□□ 0.94
LAMA5O15230 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.92■□□□□ 0.94
LAMA5O15230 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LAMA5O15230 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.91■□□□□ 0.94
LAMA5O15230 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
LAMA5O15230 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LAMA5O15230 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
LAMA5O15230 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LAMA5O15230 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
LAMA5O15230 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.9■□□□□ 0.94
LAMA5O15230 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.9■□□□□ 0.94
LAMA5O15230 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
LAMA5O15230 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.9■□□□□ 0.94
LAMA5O15230 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LAMA5O15230 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
LAMA5O15230 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LAMA5O15230 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LAMA5O15230 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LAMA5O15230 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.9■□□□□ 0.94
LAMA5O15230 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.9■□□□□ 0.94
LAMA5O15230 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.9■□□□□ 0.94
LAMA5O15230 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LAMA5O15230 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
LAMA5O15230 AC087239.1-201ENST00000622671 572 ntBASIC20.89■□□□□ 0.94
LAMA5O15230 KRT19P1-201ENST00000405746 1186 ntBASIC20.89■□□□□ 0.93
LAMA5O15230 MFSD11-216ENST00000590393 1141 ntBASIC20.89■□□□□ 0.93
LAMA5O15230 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
LAMA5O15230 AL022069.1-201ENST00000568025 1636 ntBASIC20.89■□□□□ 0.93
LAMA5O15230 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
LAMA5O15230 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.89■□□□□ 0.93
LAMA5O15230 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
LAMA5O15230 KRT18P11-201ENST00000435214 1283 ntBASIC20.89■□□□□ 0.93
LAMA5O15230 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LAMA5O15230 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
LAMA5O15230 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.88■□□□□ 0.93
LAMA5O15230 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LAMA5O15230 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LAMA5O15230 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.88■□□□□ 0.93
LAMA5O15230 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.88■□□□□ 0.93
LAMA5O15230 AC083906.2-201ENST00000511578 360 ntBASIC20.88■□□□□ 0.93
LAMA5O15230 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LAMA5O15230 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LAMA5O15230 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LAMA5O15230 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.87■□□□□ 0.93
LAMA5O15230 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LAMA5O15230 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
LAMA5O15230 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
LAMA5O15230 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.86■□□□□ 0.93
LAMA5O15230 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LAMA5O15230 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LAMA5O15230 ITM2C-210ENST00000620962 501 ntBASIC20.86■□□□□ 0.93
LAMA5O15230 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
LAMA5O15230 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
LAMA5O15230 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
LAMA5O15230 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LAMA5O15230 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
LAMA5O15230 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.85■□□□□ 0.93
LAMA5O15230 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
LAMA5O15230 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LAMA5O15230 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LAMA5O15230 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.85■□□□□ 0.93
LAMA5O15230 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LAMA5O15230 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LAMA5O15230 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
LAMA5O15230 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.84■□□□□ 0.93
LAMA5O15230 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LAMA5O15230 GCSHP5-201ENST00000443090 522 ntBASIC20.84■□□□□ 0.93
LAMA5O15230 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LAMA5O15230 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
LAMA5O15230 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LAMA5O15230 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
LAMA5O15230 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LAMA5O15230 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LAMA5O15230 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LAMA5O15230 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LAMA5O15230 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.83■□□□□ 0.93
LAMA5O15230 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LAMA5O15230 FAM201B-201ENST00000458407 597 ntBASIC20.83■□□□□ 0.93
LAMA5O15230 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LAMA5O15230 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LAMA5O15230 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LAMA5O15230 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms