Protein–RNA interactions for Protein: O14788

TNFSF11, Tumor necrosis factor ligand superfamily member 11, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11O14788 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TNFSF11O14788 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.98■□□□□ 0.79
TNFSF11O14788 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
TNFSF11O14788 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TNFSF11O14788 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TNFSF11O14788 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
TNFSF11O14788 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.97■□□□□ 0.79
TNFSF11O14788 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TNFSF11O14788 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.97■□□□□ 0.79
TNFSF11O14788 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.97■□□□□ 0.79
TNFSF11O14788 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TNFSF11O14788 MIR4767-201ENST00000582827 78 ntBASIC19.97■□□□□ 0.79
TNFSF11O14788 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.97■□□□□ 0.79
TNFSF11O14788 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
TNFSF11O14788 AC011298.3-201ENST00000615796 283 ntBASIC19.97■□□□□ 0.79
TNFSF11O14788 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
TNFSF11O14788 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TNFSF11O14788 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TNFSF11O14788 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TNFSF11O14788 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
TNFSF11O14788 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TNFSF11O14788 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
TNFSF11O14788 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.96■□□□□ 0.79
TNFSF11O14788 AL499627.2-201ENST00000606283 725 ntBASIC19.96■□□□□ 0.79
TNFSF11O14788 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TNFSF11O14788 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TNFSF11O14788 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TNFSF11O14788 AC133637.1-201ENST00000624115 1537 ntBASIC19.96■□□□□ 0.79
TNFSF11O14788 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TNFSF11O14788 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TNFSF11O14788 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
TNFSF11O14788 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
TNFSF11O14788 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TNFSF11O14788 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TNFSF11O14788 MIR638-201ENST00000385237 100 ntBASIC19.95■□□□□ 0.78
TNFSF11O14788 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TNFSF11O14788 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TNFSF11O14788 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.95■□□□□ 0.78
TNFSF11O14788 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.95■□□□□ 0.78
TNFSF11O14788 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.95■□□□□ 0.78
TNFSF11O14788 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.95■□□□□ 0.78
TNFSF11O14788 AC136469.2-201ENST00000623944 1028 ntBASIC19.95■□□□□ 0.78
TNFSF11O14788 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.95■□□□□ 0.78
TNFSF11O14788 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TNFSF11O14788 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TNFSF11O14788 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.95■□□□□ 0.78
TNFSF11O14788 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.95■□□□□ 0.78
TNFSF11O14788 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
TNFSF11O14788 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TNFSF11O14788 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TNFSF11O14788 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TNFSF11O14788 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TNFSF11O14788 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.94■□□□□ 0.78
TNFSF11O14788 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TNFSF11O14788 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
TNFSF11O14788 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TNFSF11O14788 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TNFSF11O14788 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TNFSF11O14788 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
TNFSF11O14788 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TNFSF11O14788 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.93■□□□□ 0.78
TNFSF11O14788 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TNFSF11O14788 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TNFSF11O14788 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TNFSF11O14788 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.93■□□□□ 0.78
TNFSF11O14788 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
TNFSF11O14788 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.93■□□□□ 0.78
TNFSF11O14788 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TNFSF11O14788 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
TNFSF11O14788 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
TNFSF11O14788 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TNFSF11O14788 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TNFSF11O14788 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.93■□□□□ 0.78
TNFSF11O14788 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TNFSF11O14788 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TNFSF11O14788 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TNFSF11O14788 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TNFSF11O14788 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TNFSF11O14788 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.92■□□□□ 0.78
TNFSF11O14788 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.92■□□□□ 0.78
TNFSF11O14788 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TNFSF11O14788 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
TNFSF11O14788 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TNFSF11O14788 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TNFSF11O14788 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.92■□□□□ 0.78
TNFSF11O14788 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.92■□□□□ 0.78
TNFSF11O14788 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TNFSF11O14788 AC133561.4-201ENST00000566112 224 ntBASIC19.92■□□□□ 0.78
TNFSF11O14788 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.92■□□□□ 0.78
TNFSF11O14788 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.92■□□□□ 0.78
TNFSF11O14788 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
TNFSF11O14788 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.92■□□□□ 0.78
TNFSF11O14788 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TNFSF11O14788 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.92■□□□□ 0.78
TNFSF11O14788 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TNFSF11O14788 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
TNFSF11O14788 AC004687.1-201ENST00000579003 1625 ntBASIC19.91■□□□□ 0.78
TNFSF11O14788 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.91■□□□□ 0.78
TNFSF11O14788 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TNFSF11O14788 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms