Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 ASB1-202ENST00000409297 878 ntTSL 5 BASIC17.9■□□□□ 0.46
SRRM4A7MD48 AC010997.5-201ENST00000609182 354 ntBASIC17.9■□□□□ 0.46
SRRM4A7MD48 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SRRM4A7MD48 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SRRM4A7MD48 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC17.9■□□□□ 0.46
SRRM4A7MD48 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SRRM4A7MD48 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SRRM4A7MD48 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC17.9■□□□□ 0.46
SRRM4A7MD48 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SRRM4A7MD48 LINC01529-204ENST00000636474 1715 ntBASIC17.89■□□□□ 0.46
SRRM4A7MD48 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SRRM4A7MD48 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SRRM4A7MD48 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC17.89■□□□□ 0.45
SRRM4A7MD48 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC17.89■□□□□ 0.45
SRRM4A7MD48 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SRRM4A7MD48 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SRRM4A7MD48 LSM4-201ENST00000252816 986 ntTSL 2 BASIC17.89■□□□□ 0.45
SRRM4A7MD48 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SRRM4A7MD48 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
SRRM4A7MD48 EXOG-217ENST00000630638 197 ntTSL 5 BASIC17.89■□□□□ 0.45
SRRM4A7MD48 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SRRM4A7MD48 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SRRM4A7MD48 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.89■□□□□ 0.45
SRRM4A7MD48 FP325331.1-202ENST00000623531 1380 ntBASIC17.89■□□□□ 0.45
SRRM4A7MD48 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC17.89■□□□□ 0.45
SRRM4A7MD48 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SRRM4A7MD48 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
SRRM4A7MD48 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SRRM4A7MD48 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SRRM4A7MD48 AC009102.2-201ENST00000606772 1639 ntBASIC17.88■□□□□ 0.45
SRRM4A7MD48 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SRRM4A7MD48 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC17.88■□□□□ 0.45
SRRM4A7MD48 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SRRM4A7MD48 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SRRM4A7MD48 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SRRM4A7MD48 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC17.88■□□□□ 0.45
SRRM4A7MD48 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
SRRM4A7MD48 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
SRRM4A7MD48 STK25-234ENST00000535007 2459 ntTSL 2 BASIC17.88■□□□□ 0.45
SRRM4A7MD48 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SRRM4A7MD48 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SRRM4A7MD48 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SRRM4A7MD48 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC17.87■□□□□ 0.45
SRRM4A7MD48 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SRRM4A7MD48 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC17.87■□□□□ 0.45
SRRM4A7MD48 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SRRM4A7MD48 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SRRM4A7MD48 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
SRRM4A7MD48 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SRRM4A7MD48 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SRRM4A7MD48 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SRRM4A7MD48 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SRRM4A7MD48 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SRRM4A7MD48 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SRRM4A7MD48 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SRRM4A7MD48 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SRRM4A7MD48 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SRRM4A7MD48 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SRRM4A7MD48 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SRRM4A7MD48 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SRRM4A7MD48 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SRRM4A7MD48 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
SRRM4A7MD48 TFPT-201ENST00000391757 774 ntTSL 5 BASIC17.86■□□□□ 0.45
SRRM4A7MD48 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SRRM4A7MD48 CREM-229ENST00000474362 1030 ntTSL 2 BASIC17.86■□□□□ 0.45
SRRM4A7MD48 UNC93B8-201ENST00000511903 705 ntBASIC17.86■□□□□ 0.45
SRRM4A7MD48 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SRRM4A7MD48 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SRRM4A7MD48 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SRRM4A7MD48 ESRRAP2-201ENST00000418437 1549 ntBASIC17.86■□□□□ 0.45
SRRM4A7MD48 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SRRM4A7MD48 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC17.86■□□□□ 0.45
SRRM4A7MD48 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SRRM4A7MD48 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
SRRM4A7MD48 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SRRM4A7MD48 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
SRRM4A7MD48 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SRRM4A7MD48 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
SRRM4A7MD48 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SRRM4A7MD48 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
SRRM4A7MD48 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SRRM4A7MD48 NKILA-201ENST00000613231 537 ntTSL 4 BASIC17.85■□□□□ 0.45
SRRM4A7MD48 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC17.85■□□□□ 0.45
SRRM4A7MD48 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRRM4A7MD48 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SRRM4A7MD48 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC17.84■□□□□ 0.45
SRRM4A7MD48 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRRM4A7MD48 LSR-203ENST00000360798 1963 ntTSL 2 BASIC17.84■□□□□ 0.45
SRRM4A7MD48 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SRRM4A7MD48 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC17.84■□□□□ 0.45
SRRM4A7MD48 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SRRM4A7MD48 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SRRM4A7MD48 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRRM4A7MD48 OR2A1-AS1-204ENST00000470435 602 ntBASIC17.84■□□□□ 0.45
SRRM4A7MD48 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SRRM4A7MD48 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRRM4A7MD48 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRRM4A7MD48 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRRM4A7MD48 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SRRM4A7MD48 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms