Protein–RNA interactions for Protein: A6NKF1

SAC3D1, SAC3 domain-containing protein 1, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAC3D1A6NKF1 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SAC3D1A6NKF1 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
SAC3D1A6NKF1 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SAC3D1A6NKF1 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.84■□□□□ 0.93
SAC3D1A6NKF1 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
SAC3D1A6NKF1 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SAC3D1A6NKF1 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
SAC3D1A6NKF1 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.84■□□□□ 0.93
SAC3D1A6NKF1 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SAC3D1A6NKF1 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
SAC3D1A6NKF1 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
SAC3D1A6NKF1 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SAC3D1A6NKF1 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SAC3D1A6NKF1 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
SAC3D1A6NKF1 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SAC3D1A6NKF1 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SAC3D1A6NKF1 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SAC3D1A6NKF1 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
SAC3D1A6NKF1 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SAC3D1A6NKF1 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SAC3D1A6NKF1 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
SAC3D1A6NKF1 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.83■□□□□ 0.92
SAC3D1A6NKF1 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
SAC3D1A6NKF1 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SAC3D1A6NKF1 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.82■□□□□ 0.92
SAC3D1A6NKF1 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.82■□□□□ 0.92
SAC3D1A6NKF1 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SAC3D1A6NKF1 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SAC3D1A6NKF1 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.82■□□□□ 0.92
SAC3D1A6NKF1 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SAC3D1A6NKF1 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.81■□□□□ 0.92
SAC3D1A6NKF1 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SAC3D1A6NKF1 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.81■□□□□ 0.92
SAC3D1A6NKF1 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.81■□□□□ 0.92
SAC3D1A6NKF1 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
SAC3D1A6NKF1 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SAC3D1A6NKF1 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.81■□□□□ 0.92
SAC3D1A6NKF1 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SAC3D1A6NKF1 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
SAC3D1A6NKF1 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
SAC3D1A6NKF1 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
SAC3D1A6NKF1 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SAC3D1A6NKF1 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SAC3D1A6NKF1 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
SAC3D1A6NKF1 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.8■□□□□ 0.92
SAC3D1A6NKF1 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SAC3D1A6NKF1 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SAC3D1A6NKF1 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SAC3D1A6NKF1 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SAC3D1A6NKF1 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SAC3D1A6NKF1 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.8■□□□□ 0.92
SAC3D1A6NKF1 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.8■□□□□ 0.92
SAC3D1A6NKF1 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SAC3D1A6NKF1 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SAC3D1A6NKF1 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SAC3D1A6NKF1 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SAC3D1A6NKF1 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SAC3D1A6NKF1 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
SAC3D1A6NKF1 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SAC3D1A6NKF1 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SAC3D1A6NKF1 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SAC3D1A6NKF1 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SAC3D1A6NKF1 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SAC3D1A6NKF1 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SAC3D1A6NKF1 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.79■□□□□ 0.92
SAC3D1A6NKF1 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SAC3D1A6NKF1 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.79■□□□□ 0.92
SAC3D1A6NKF1 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SAC3D1A6NKF1 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SAC3D1A6NKF1 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SAC3D1A6NKF1 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SAC3D1A6NKF1 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.78■□□□□ 0.92
SAC3D1A6NKF1 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SAC3D1A6NKF1 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SAC3D1A6NKF1 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
SAC3D1A6NKF1 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SAC3D1A6NKF1 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SAC3D1A6NKF1 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.78■□□□□ 0.92
SAC3D1A6NKF1 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SAC3D1A6NKF1 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SAC3D1A6NKF1 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.78■□□□□ 0.92
SAC3D1A6NKF1 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SAC3D1A6NKF1 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SAC3D1A6NKF1 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.77■□□□□ 0.92
SAC3D1A6NKF1 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SAC3D1A6NKF1 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SAC3D1A6NKF1 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SAC3D1A6NKF1 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SAC3D1A6NKF1 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.77■□□□□ 0.92
SAC3D1A6NKF1 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SAC3D1A6NKF1 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.77■□□□□ 0.92
SAC3D1A6NKF1 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.77■□□□□ 0.92
SAC3D1A6NKF1 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.77■□□□□ 0.92
SAC3D1A6NKF1 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
SAC3D1A6NKF1 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.76■□□□□ 0.91
SAC3D1A6NKF1 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.76■□□□□ 0.91
SAC3D1A6NKF1 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.76■□□□□ 0.91
SAC3D1A6NKF1 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SAC3D1A6NKF1 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
SAC3D1A6NKF1 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms