Protein–RNA interactions for Protein: A6NHT5

HMX3, Homeobox protein HMX3, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMX3A6NHT5 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC19.24■□□□□ 0.67
HMX3A6NHT5 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HMX3A6NHT5 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HMX3A6NHT5 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HMX3A6NHT5 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HMX3A6NHT5 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HMX3A6NHT5 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMX3A6NHT5 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
HMX3A6NHT5 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.23■□□□□ 0.67
HMX3A6NHT5 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMX3A6NHT5 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMX3A6NHT5 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMX3A6NHT5 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HMX3A6NHT5 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.23■□□□□ 0.67
HMX3A6NHT5 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HMX3A6NHT5 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.23■□□□□ 0.67
HMX3A6NHT5 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
HMX3A6NHT5 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
HMX3A6NHT5 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HMX3A6NHT5 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.22■□□□□ 0.67
HMX3A6NHT5 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
HMX3A6NHT5 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMX3A6NHT5 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HMX3A6NHT5 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
HMX3A6NHT5 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HMX3A6NHT5 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.22■□□□□ 0.67
HMX3A6NHT5 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
HMX3A6NHT5 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
HMX3A6NHT5 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMX3A6NHT5 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMX3A6NHT5 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HMX3A6NHT5 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.21■□□□□ 0.67
HMX3A6NHT5 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.21■□□□□ 0.67
HMX3A6NHT5 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HMX3A6NHT5 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
HMX3A6NHT5 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HMX3A6NHT5 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HMX3A6NHT5 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HMX3A6NHT5 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HMX3A6NHT5 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HMX3A6NHT5 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
HMX3A6NHT5 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HMX3A6NHT5 AC060814.1-201ENST00000554326 538 ntBASIC19.21■□□□□ 0.67
HMX3A6NHT5 AC005229.4-201ENST00000610085 2198 ntBASIC19.21■□□□□ 0.67
HMX3A6NHT5 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HMX3A6NHT5 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HMX3A6NHT5 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
HMX3A6NHT5 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
HMX3A6NHT5 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HMX3A6NHT5 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
HMX3A6NHT5 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.2■□□□□ 0.66
HMX3A6NHT5 LINC01521-201ENST00000504184 1943 ntBASIC19.2■□□□□ 0.66
HMX3A6NHT5 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HMX3A6NHT5 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.2■□□□□ 0.66
HMX3A6NHT5 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.2■□□□□ 0.66
HMX3A6NHT5 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.2■□□□□ 0.66
HMX3A6NHT5 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMX3A6NHT5 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.19■□□□□ 0.66
HMX3A6NHT5 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMX3A6NHT5 AL157400.5-201ENST00000507624 621 ntBASIC19.19■□□□□ 0.66
HMX3A6NHT5 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.19■□□□□ 0.66
HMX3A6NHT5 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMX3A6NHT5 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HMX3A6NHT5 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMX3A6NHT5 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMX3A6NHT5 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
HMX3A6NHT5 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.18■□□□□ 0.66
HMX3A6NHT5 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMX3A6NHT5 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.18■□□□□ 0.66
HMX3A6NHT5 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HMX3A6NHT5 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HMX3A6NHT5 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HMX3A6NHT5 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
HMX3A6NHT5 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMX3A6NHT5 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMX3A6NHT5 MBP-237ENST00000579129 1052 ntTSL 5 BASIC19.18■□□□□ 0.66
HMX3A6NHT5 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMX3A6NHT5 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
HMX3A6NHT5 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMX3A6NHT5 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMX3A6NHT5 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
HMX3A6NHT5 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HMX3A6NHT5 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HMX3A6NHT5 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.18■□□□□ 0.66
HMX3A6NHT5 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMX3A6NHT5 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HMX3A6NHT5 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMX3A6NHT5 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.17■□□□□ 0.66
HMX3A6NHT5 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.17■□□□□ 0.66
HMX3A6NHT5 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.17■□□□□ 0.66
HMX3A6NHT5 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMX3A6NHT5 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HMX3A6NHT5 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
HMX3A6NHT5 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
HMX3A6NHT5 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMX3A6NHT5 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.17■□□□□ 0.66
HMX3A6NHT5 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMX3A6NHT5 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMX3A6NHT5 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.17■□□□□ 0.66
HMX3A6NHT5 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms