Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TVP23AA6NH52 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TVP23AA6NH52 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TVP23AA6NH52 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TVP23AA6NH52 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.79■□□□□ 0.76
TVP23AA6NH52 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TVP23AA6NH52 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TVP23AA6NH52 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TVP23AA6NH52 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TVP23AA6NH52 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TVP23AA6NH52 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.78■□□□□ 0.76
TVP23AA6NH52 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TVP23AA6NH52 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TVP23AA6NH52 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TVP23AA6NH52 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TVP23AA6NH52 LINC00526-201ENST00000581067 1875 ntBASIC19.78■□□□□ 0.76
TVP23AA6NH52 LINC00565-201ENST00000562710 2331 ntBASIC19.78■□□□□ 0.76
TVP23AA6NH52 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
TVP23AA6NH52 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TVP23AA6NH52 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.78■□□□□ 0.76
TVP23AA6NH52 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.77■□□□□ 0.76
TVP23AA6NH52 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.77■□□□□ 0.76
TVP23AA6NH52 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
TVP23AA6NH52 AC144652.1-201ENST00000609974 1624 ntBASIC19.77■□□□□ 0.76
TVP23AA6NH52 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TVP23AA6NH52 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.77■□□□□ 0.76
TVP23AA6NH52 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.77■□□□□ 0.76
TVP23AA6NH52 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
TVP23AA6NH52 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TVP23AA6NH52 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
TVP23AA6NH52 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TVP23AA6NH52 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.77■□□□□ 0.76
TVP23AA6NH52 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
TVP23AA6NH52 AC021242.3-201ENST00000607598 1377 ntBASIC19.77■□□□□ 0.76
TVP23AA6NH52 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TVP23AA6NH52 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.77■□□□□ 0.75
TVP23AA6NH52 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.77■□□□□ 0.75
TVP23AA6NH52 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TVP23AA6NH52 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.77■□□□□ 0.75
TVP23AA6NH52 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
TVP23AA6NH52 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TVP23AA6NH52 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.76■□□□□ 0.75
TVP23AA6NH52 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.76■□□□□ 0.75
TVP23AA6NH52 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
TVP23AA6NH52 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TVP23AA6NH52 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
TVP23AA6NH52 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
TVP23AA6NH52 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.76■□□□□ 0.75
TVP23AA6NH52 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TVP23AA6NH52 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TVP23AA6NH52 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
TVP23AA6NH52 BX664725.1-201ENST00000438252 379 ntBASIC19.76■□□□□ 0.75
TVP23AA6NH52 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TVP23AA6NH52 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.76■□□□□ 0.75
TVP23AA6NH52 CLDN5-201ENST00000403084 2357 ntBASIC19.76■□□□□ 0.75
TVP23AA6NH52 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TVP23AA6NH52 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TVP23AA6NH52 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TVP23AA6NH52 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TVP23AA6NH52 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
TVP23AA6NH52 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TVP23AA6NH52 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
TVP23AA6NH52 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.75■□□□□ 0.75
TVP23AA6NH52 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
TVP23AA6NH52 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.75■□□□□ 0.75
TVP23AA6NH52 ECEL1P1-201ENST00000373592 1742 ntBASIC19.75■□□□□ 0.75
TVP23AA6NH52 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
TVP23AA6NH52 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TVP23AA6NH52 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TVP23AA6NH52 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TVP23AA6NH52 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TVP23AA6NH52 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TVP23AA6NH52 AC005703.6-201ENST00000623265 1329 ntBASIC19.75■□□□□ 0.75
TVP23AA6NH52 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TVP23AA6NH52 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TVP23AA6NH52 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
TVP23AA6NH52 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TVP23AA6NH52 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
TVP23AA6NH52 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TVP23AA6NH52 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.74■□□□□ 0.75
TVP23AA6NH52 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
TVP23AA6NH52 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TVP23AA6NH52 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TVP23AA6NH52 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TVP23AA6NH52 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TVP23AA6NH52 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
TVP23AA6NH52 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19.74■□□□□ 0.75
TVP23AA6NH52 ESRRAP2-201ENST00000418437 1549 ntBASIC19.74■□□□□ 0.75
TVP23AA6NH52 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TVP23AA6NH52 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TVP23AA6NH52 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
TVP23AA6NH52 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.74■□□□□ 0.75
TVP23AA6NH52 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TVP23AA6NH52 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
TVP23AA6NH52 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TVP23AA6NH52 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TVP23AA6NH52 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TVP23AA6NH52 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.73■□□□□ 0.75
TVP23AA6NH52 MIR6722-201ENST00000617286 78 ntBASIC19.73■□□□□ 0.75
TVP23AA6NH52 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms