Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
SBNO1A3KN83 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
SBNO1A3KN83 ABHD17AP1-201ENST00000358206 933 ntBASIC30.56■■■□□ 2.48
SBNO1A3KN83 MFF-208ENST00000409616 1247 ntTSL 5 BASIC30.56■■■□□ 2.48
SBNO1A3KN83 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC30.56■■■□□ 2.48
SBNO1A3KN83 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC30.56■■■□□ 2.48
SBNO1A3KN83 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC30.56■■■□□ 2.48
SBNO1A3KN83 AC137761.2-201ENST00000561729 223 ntBASIC30.56■■■□□ 2.48
SBNO1A3KN83 AC145350.3-201ENST00000569033 163 ntBASIC30.56■■■□□ 2.48
SBNO1A3KN83 GALNS-213ENST00000569433 723 ntTSL 3 BASIC30.56■■■□□ 2.48
SBNO1A3KN83 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC30.56■■■□□ 2.48
SBNO1A3KN83 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC30.56■■■□□ 2.48
SBNO1A3KN83 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
SBNO1A3KN83 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC30.55■■■□□ 2.48
SBNO1A3KN83 STX7-201ENST00000367937 1090 ntTSL 5 BASIC30.55■■■□□ 2.48
SBNO1A3KN83 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC30.55■■■□□ 2.48
SBNO1A3KN83 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC30.55■■■□□ 2.48
SBNO1A3KN83 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC30.55■■■□□ 2.48
SBNO1A3KN83 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC30.55■■■□□ 2.48
SBNO1A3KN83 FP325331.1-202ENST00000623531 1380 ntBASIC30.55■■■□□ 2.48
SBNO1A3KN83 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
SBNO1A3KN83 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
SBNO1A3KN83 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
SBNO1A3KN83 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC30.55■■■□□ 2.48
SBNO1A3KN83 AC016769.1-201ENST00000409132 1010 ntBASIC30.54■■■□□ 2.48
SBNO1A3KN83 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC30.54■■■□□ 2.48
SBNO1A3KN83 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC30.54■■■□□ 2.48
SBNO1A3KN83 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
SBNO1A3KN83 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
SBNO1A3KN83 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
SBNO1A3KN83 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC30.54■■■□□ 2.48
SBNO1A3KN83 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC30.54■■■□□ 2.48
SBNO1A3KN83 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
SBNO1A3KN83 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC30.54■■■□□ 2.48
SBNO1A3KN83 AC026185.1-201ENST00000445748 174 ntBASIC30.54■■■□□ 2.48
SBNO1A3KN83 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
SBNO1A3KN83 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
SBNO1A3KN83 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC30.53■■■□□ 2.48
SBNO1A3KN83 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC30.53■■■□□ 2.48
SBNO1A3KN83 PPP1R14BP3-201ENST00000509033 445 ntBASIC30.53■■■□□ 2.48
SBNO1A3KN83 DBI-210ENST00000542275 757 ntTSL 5 BASIC30.53■■■□□ 2.48
SBNO1A3KN83 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC30.53■■■□□ 2.48
SBNO1A3KN83 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
SBNO1A3KN83 AC022211.4-201ENST00000625094 2161 ntBASIC30.52■■■□□ 2.48
SBNO1A3KN83 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
SBNO1A3KN83 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
SBNO1A3KN83 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC30.52■■■□□ 2.48
SBNO1A3KN83 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
SBNO1A3KN83 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC30.52■■■□□ 2.48
SBNO1A3KN83 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC30.52■■■□□ 2.48
SBNO1A3KN83 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC30.51■■■□□ 2.48
SBNO1A3KN83 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
SBNO1A3KN83 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
SBNO1A3KN83 MAP2K4P1-201ENST00000438453 1195 ntBASIC30.51■■■□□ 2.47
SBNO1A3KN83 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC30.51■■■□□ 2.47
SBNO1A3KN83 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
SBNO1A3KN83 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC30.51■■■□□ 2.47
SBNO1A3KN83 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
SBNO1A3KN83 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC30.51■■■□□ 2.47
SBNO1A3KN83 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC30.51■■■□□ 2.47
SBNO1A3KN83 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC30.51■■■□□ 2.47
SBNO1A3KN83 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC30.51■■■□□ 2.47
SBNO1A3KN83 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC30.5■■■□□ 2.47
SBNO1A3KN83 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC30.5■■■□□ 2.47
SBNO1A3KN83 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC30.5■■■□□ 2.47
SBNO1A3KN83 SHD-204ENST00000599689 1729 ntTSL 5 BASIC30.5■■■□□ 2.47
SBNO1A3KN83 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC30.5■■■□□ 2.47
SBNO1A3KN83 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC30.5■■■□□ 2.47
SBNO1A3KN83 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC30.5■■■□□ 2.47
SBNO1A3KN83 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
SBNO1A3KN83 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC30.5■■■□□ 2.47
SBNO1A3KN83 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
SBNO1A3KN83 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC30.5■■■□□ 2.47
SBNO1A3KN83 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
SBNO1A3KN83 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC30.5■■■□□ 2.47
SBNO1A3KN83 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC30.5■■■□□ 2.47
SBNO1A3KN83 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
SBNO1A3KN83 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
SBNO1A3KN83 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC30.49■■■□□ 2.47
SBNO1A3KN83 AP004607.4-201ENST00000530158 1459 ntBASIC30.49■■■□□ 2.47
SBNO1A3KN83 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
SBNO1A3KN83 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC30.49■■■□□ 2.47
SBNO1A3KN83 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC30.49■■■□□ 2.47
SBNO1A3KN83 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC30.49■■■□□ 2.47
SBNO1A3KN83 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC30.48■■■□□ 2.47
SBNO1A3KN83 WWOX-218ENST00000627394 894 ntTSL 5 BASIC30.48■■■□□ 2.47
SBNO1A3KN83 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
SBNO1A3KN83 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC30.48■■■□□ 2.47
SBNO1A3KN83 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC30.47■■■□□ 2.47
SBNO1A3KN83 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
SBNO1A3KN83 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC30.47■■■□□ 2.47
SBNO1A3KN83 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
SBNO1A3KN83 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC30.47■■■□□ 2.47
SBNO1A3KN83 CROCCP5-201ENST00000436658 830 ntBASIC30.47■■■□□ 2.47
SBNO1A3KN83 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC30.47■■■□□ 2.47
SBNO1A3KN83 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC30.47■■■□□ 2.47
SBNO1A3KN83 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC30.47■■■□□ 2.47
SBNO1A3KN83 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
SBNO1A3KN83 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC30.47■■■□□ 2.47
SBNO1A3KN83 STX4-202ENST00000394998 1498 ntTSL 2 BASIC30.47■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms