Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TCRBV5S1A1TA0A578 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC23.34■■□□□ 1.33
TCRBV5S1A1TA0A578 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
TCRBV5S1A1TA0A578 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TCRBV5S1A1TA0A578 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC23.33■■□□□ 1.33
TCRBV5S1A1TA0A578 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TCRBV5S1A1TA0A578 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TCRBV5S1A1TA0A578 TERT-206ENST00000508104 2486 ntTSL 5 BASIC23.33■■□□□ 1.33
TCRBV5S1A1TA0A578 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TCRBV5S1A1TA0A578 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC23.33■■□□□ 1.33
TCRBV5S1A1TA0A578 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
TCRBV5S1A1TA0A578 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.33■■□□□ 1.33
TCRBV5S1A1TA0A578 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
TCRBV5S1A1TA0A578 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TCRBV5S1A1TA0A578 AL512631.2-201ENST00000604634 923 ntBASIC23.33■■□□□ 1.33
TCRBV5S1A1TA0A578 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TCRBV5S1A1TA0A578 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
TCRBV5S1A1TA0A578 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.32
TCRBV5S1A1TA0A578 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC23.33■■□□□ 1.32
TCRBV5S1A1TA0A578 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
TCRBV5S1A1TA0A578 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC23.32■■□□□ 1.32
TCRBV5S1A1TA0A578 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TCRBV5S1A1TA0A578 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TCRBV5S1A1TA0A578 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TCRBV5S1A1TA0A578 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TCRBV5S1A1TA0A578 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
TCRBV5S1A1TA0A578 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TCRBV5S1A1TA0A578 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC23.32■■□□□ 1.32
TCRBV5S1A1TA0A578 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TCRBV5S1A1TA0A578 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
TCRBV5S1A1TA0A578 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.31■■□□□ 1.32
TCRBV5S1A1TA0A578 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TCRBV5S1A1TA0A578 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.31■■□□□ 1.32
TCRBV5S1A1TA0A578 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC23.31■■□□□ 1.32
TCRBV5S1A1TA0A578 AL356740.2-201ENST00000601559 647 ntBASIC23.31■■□□□ 1.32
TCRBV5S1A1TA0A578 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TCRBV5S1A1TA0A578 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.31■■□□□ 1.32
TCRBV5S1A1TA0A578 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.31■■□□□ 1.32
TCRBV5S1A1TA0A578 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TCRBV5S1A1TA0A578 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC23.31■■□□□ 1.32
TCRBV5S1A1TA0A578 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
TCRBV5S1A1TA0A578 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
TCRBV5S1A1TA0A578 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
TCRBV5S1A1TA0A578 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TCRBV5S1A1TA0A578 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TCRBV5S1A1TA0A578 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TCRBV5S1A1TA0A578 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
TCRBV5S1A1TA0A578 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TCRBV5S1A1TA0A578 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TCRBV5S1A1TA0A578 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
TCRBV5S1A1TA0A578 AL499627.2-201ENST00000606283 725 ntBASIC23.3■■□□□ 1.32
TCRBV5S1A1TA0A578 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC23.3■■□□□ 1.32
TCRBV5S1A1TA0A578 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.3■■□□□ 1.32
TCRBV5S1A1TA0A578 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.3■■□□□ 1.32
TCRBV5S1A1TA0A578 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
TCRBV5S1A1TA0A578 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC23.3■■□□□ 1.32
TCRBV5S1A1TA0A578 AC087742.1-201ENST00000575880 1738 ntBASIC23.3■■□□□ 1.32
TCRBV5S1A1TA0A578 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
TCRBV5S1A1TA0A578 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
TCRBV5S1A1TA0A578 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
TCRBV5S1A1TA0A578 ESRRAP2-201ENST00000418437 1549 ntBASIC23.29■■□□□ 1.32
TCRBV5S1A1TA0A578 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC23.29■■□□□ 1.32
TCRBV5S1A1TA0A578 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
TCRBV5S1A1TA0A578 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
TCRBV5S1A1TA0A578 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
TCRBV5S1A1TA0A578 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.29■■□□□ 1.32
TCRBV5S1A1TA0A578 AC009086.3-201ENST00000623486 1008 ntBASIC23.29■■□□□ 1.32
TCRBV5S1A1TA0A578 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
TCRBV5S1A1TA0A578 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC23.29■■□□□ 1.32
TCRBV5S1A1TA0A578 AL117328.2-201ENST00000624617 1940 ntBASIC23.29■■□□□ 1.32
TCRBV5S1A1TA0A578 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC23.29■■□□□ 1.32
TCRBV5S1A1TA0A578 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
TCRBV5S1A1TA0A578 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.29■■□□□ 1.32
TCRBV5S1A1TA0A578 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
TCRBV5S1A1TA0A578 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC23.28■■□□□ 1.32
TCRBV5S1A1TA0A578 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TCRBV5S1A1TA0A578 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.28■■□□□ 1.32
TCRBV5S1A1TA0A578 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.28■■□□□ 1.32
TCRBV5S1A1TA0A578 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TCRBV5S1A1TA0A578 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
TCRBV5S1A1TA0A578 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TCRBV5S1A1TA0A578 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TCRBV5S1A1TA0A578 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC23.27■■□□□ 1.32
TCRBV5S1A1TA0A578 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TCRBV5S1A1TA0A578 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TCRBV5S1A1TA0A578 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TCRBV5S1A1TA0A578 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.27■■□□□ 1.32
TCRBV5S1A1TA0A578 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TCRBV5S1A1TA0A578 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC23.27■■□□□ 1.32
TCRBV5S1A1TA0A578 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.27■■□□□ 1.32
TCRBV5S1A1TA0A578 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TCRBV5S1A1TA0A578 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
TCRBV5S1A1TA0A578 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TCRBV5S1A1TA0A578 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TCRBV5S1A1TA0A578 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TCRBV5S1A1TA0A578 AC127496.7-201ENST00000625110 1798 ntBASIC23.27■■□□□ 1.32
TCRBV5S1A1TA0A578 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
TCRBV5S1A1TA0A578 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC23.27■■□□□ 1.31
TCRBV5S1A1TA0A578 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
TCRBV5S1A1TA0A578 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms