Protein–RNA interactions for Protein: A0A1B0GVL6

TMEM238L, HCG1800530, isoform CRA_b, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238LA0A1B0GVL6 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TMEM238LA0A1B0GVL6 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
TMEM238LA0A1B0GVL6 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM238LA0A1B0GVL6 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM238LA0A1B0GVL6 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM238LA0A1B0GVL6 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM238LA0A1B0GVL6 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM238LA0A1B0GVL6 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
TMEM238LA0A1B0GVL6 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
TMEM238LA0A1B0GVL6 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM238LA0A1B0GVL6 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM238LA0A1B0GVL6 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC15.54■□□□□ 0.08
TMEM238LA0A1B0GVL6 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.54■□□□□ 0.08
TMEM238LA0A1B0GVL6 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TMEM238LA0A1B0GVL6 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM238LA0A1B0GVL6 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TMEM238LA0A1B0GVL6 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM238LA0A1B0GVL6 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM238LA0A1B0GVL6 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TMEM238LA0A1B0GVL6 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM238LA0A1B0GVL6 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
TMEM238LA0A1B0GVL6 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC15.54■□□□□ 0.08
TMEM238LA0A1B0GVL6 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM238LA0A1B0GVL6 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM238LA0A1B0GVL6 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM238LA0A1B0GVL6 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC15.54■□□□□ 0.08
TMEM238LA0A1B0GVL6 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM238LA0A1B0GVL6 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC15.54■□□□□ 0.08
TMEM238LA0A1B0GVL6 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC15.54■□□□□ 0.08
TMEM238LA0A1B0GVL6 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM238LA0A1B0GVL6 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC15.53■□□□□ 0.08
TMEM238LA0A1B0GVL6 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM238LA0A1B0GVL6 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM238LA0A1B0GVL6 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM238LA0A1B0GVL6 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM238LA0A1B0GVL6 ANOS2P-203ENST00000472227 1816 ntBASIC15.53■□□□□ 0.08
TMEM238LA0A1B0GVL6 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC15.53■□□□□ 0.08
TMEM238LA0A1B0GVL6 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC15.53■□□□□ 0.08
TMEM238LA0A1B0GVL6 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TMEM238LA0A1B0GVL6 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM238LA0A1B0GVL6 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM238LA0A1B0GVL6 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM238LA0A1B0GVL6 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM238LA0A1B0GVL6 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM238LA0A1B0GVL6 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM238LA0A1B0GVL6 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM238LA0A1B0GVL6 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM238LA0A1B0GVL6 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM238LA0A1B0GVL6 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM238LA0A1B0GVL6 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM238LA0A1B0GVL6 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC15.52■□□□□ 0.08
TMEM238LA0A1B0GVL6 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TMEM238LA0A1B0GVL6 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TMEM238LA0A1B0GVL6 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TMEM238LA0A1B0GVL6 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TMEM238LA0A1B0GVL6 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC15.52■□□□□ 0.08
TMEM238LA0A1B0GVL6 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
TMEM238LA0A1B0GVL6 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TMEM238LA0A1B0GVL6 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC15.52■□□□□ 0.08
TMEM238LA0A1B0GVL6 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TMEM238LA0A1B0GVL6 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TMEM238LA0A1B0GVL6 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
TMEM238LA0A1B0GVL6 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TMEM238LA0A1B0GVL6 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TMEM238LA0A1B0GVL6 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TMEM238LA0A1B0GVL6 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TMEM238LA0A1B0GVL6 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.07
TMEM238LA0A1B0GVL6 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TMEM238LA0A1B0GVL6 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
TMEM238LA0A1B0GVL6 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TMEM238LA0A1B0GVL6 AC092068.2-201ENST00000590491 1708 ntBASIC15.51■□□□□ 0.07
TMEM238LA0A1B0GVL6 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TMEM238LA0A1B0GVL6 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.51■□□□□ 0.07
TMEM238LA0A1B0GVL6 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TMEM238LA0A1B0GVL6 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TMEM238LA0A1B0GVL6 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TMEM238LA0A1B0GVL6 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TMEM238LA0A1B0GVL6 MIR6089-201ENST00000616698 64 ntBASIC15.51■□□□□ 0.07
TMEM238LA0A1B0GVL6 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TMEM238LA0A1B0GVL6 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TMEM238LA0A1B0GVL6 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TMEM238LA0A1B0GVL6 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TMEM238LA0A1B0GVL6 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TMEM238LA0A1B0GVL6 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC15.51■□□□□ 0.07
TMEM238LA0A1B0GVL6 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TMEM238LA0A1B0GVL6 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TMEM238LA0A1B0GVL6 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM238LA0A1B0GVL6 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM238LA0A1B0GVL6 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC15.5■□□□□ 0.07
TMEM238LA0A1B0GVL6 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TMEM238LA0A1B0GVL6 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM238LA0A1B0GVL6 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM238LA0A1B0GVL6 STX6-204ENST00000542060 4809 ntTSL 2 BASIC15.5■□□□□ 0.07
TMEM238LA0A1B0GVL6 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
TMEM238LA0A1B0GVL6 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM238LA0A1B0GVL6 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM238LA0A1B0GVL6 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM238LA0A1B0GVL6 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC15.5■□□□□ 0.07
TMEM238LA0A1B0GVL6 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TMEM238LA0A1B0GVL6 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms