Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV25A0A0B4J276 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV25A0A0B4J276 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC16.7■□□□□ 0.26
TRAV25A0A0B4J276 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC16.7■□□□□ 0.26
TRAV25A0A0B4J276 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC16.7■□□□□ 0.26
TRAV25A0A0B4J276 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV25A0A0B4J276 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TRAV25A0A0B4J276 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV25A0A0B4J276 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV25A0A0B4J276 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC16.7■□□□□ 0.26
TRAV25A0A0B4J276 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV25A0A0B4J276 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC16.69■□□□□ 0.26
TRAV25A0A0B4J276 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV25A0A0B4J276 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV25A0A0B4J276 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV25A0A0B4J276 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV25A0A0B4J276 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV25A0A0B4J276 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC16.69■□□□□ 0.26
TRAV25A0A0B4J276 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV25A0A0B4J276 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV25A0A0B4J276 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC16.69■□□□□ 0.26
TRAV25A0A0B4J276 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV25A0A0B4J276 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV25A0A0B4J276 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC16.69■□□□□ 0.26
TRAV25A0A0B4J276 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC16.68■□□□□ 0.26
TRAV25A0A0B4J276 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
TRAV25A0A0B4J276 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC16.68■□□□□ 0.26
TRAV25A0A0B4J276 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV25A0A0B4J276 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC16.68■□□□□ 0.26
TRAV25A0A0B4J276 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC16.68■□□□□ 0.26
TRAV25A0A0B4J276 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC16.68■□□□□ 0.26
TRAV25A0A0B4J276 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC16.68■□□□□ 0.26
TRAV25A0A0B4J276 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC16.68■□□□□ 0.26
TRAV25A0A0B4J276 AL355001.2-201ENST00000620617 1191 ntBASIC16.68■□□□□ 0.26
TRAV25A0A0B4J276 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
TRAV25A0A0B4J276 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV25A0A0B4J276 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV25A0A0B4J276 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV25A0A0B4J276 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TRAV25A0A0B4J276 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
TRAV25A0A0B4J276 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV25A0A0B4J276 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV25A0A0B4J276 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TRAV25A0A0B4J276 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC16.67■□□□□ 0.26
TRAV25A0A0B4J276 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV25A0A0B4J276 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV25A0A0B4J276 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV25A0A0B4J276 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV25A0A0B4J276 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
TRAV25A0A0B4J276 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
TRAV25A0A0B4J276 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV25A0A0B4J276 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TRAV25A0A0B4J276 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV25A0A0B4J276 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV25A0A0B4J276 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC16.66■□□□□ 0.26
TRAV25A0A0B4J276 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV25A0A0B4J276 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV25A0A0B4J276 MTURN-203ENST00000409688 843 ntTSL 2 BASIC16.66■□□□□ 0.26
TRAV25A0A0B4J276 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV25A0A0B4J276 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TRAV25A0A0B4J276 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC16.66■□□□□ 0.26
TRAV25A0A0B4J276 MIR4767-201ENST00000582827 78 ntBASIC16.66■□□□□ 0.26
TRAV25A0A0B4J276 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TRAV25A0A0B4J276 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV25A0A0B4J276 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV25A0A0B4J276 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV25A0A0B4J276 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TRAV25A0A0B4J276 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV25A0A0B4J276 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV25A0A0B4J276 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV25A0A0B4J276 THRA-202ENST00000394121 2260 ntTSL 2 BASIC16.65■□□□□ 0.26
TRAV25A0A0B4J276 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV25A0A0B4J276 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV25A0A0B4J276 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV25A0A0B4J276 BX842568.3-201ENST00000418104 571 ntBASIC16.65■□□□□ 0.26
TRAV25A0A0B4J276 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC16.65■□□□□ 0.26
TRAV25A0A0B4J276 OR2I1P-207ENST00000453522 948 ntBASIC16.65■□□□□ 0.26
TRAV25A0A0B4J276 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC16.65■□□□□ 0.26
TRAV25A0A0B4J276 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC16.65■□□□□ 0.26
TRAV25A0A0B4J276 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TRAV25A0A0B4J276 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC16.65■□□□□ 0.26
TRAV25A0A0B4J276 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC16.65■□□□□ 0.26
TRAV25A0A0B4J276 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV25A0A0B4J276 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TRAV25A0A0B4J276 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
TRAV25A0A0B4J276 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TRAV25A0A0B4J276 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV25A0A0B4J276 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV25A0A0B4J276 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC16.65■□□□□ 0.26
TRAV25A0A0B4J276 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV25A0A0B4J276 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV25A0A0B4J276 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV25A0A0B4J276 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC16.64■□□□□ 0.25
TRAV25A0A0B4J276 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV25A0A0B4J276 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV25A0A0B4J276 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV25A0A0B4J276 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV25A0A0B4J276 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV25A0A0B4J276 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
TRAV25A0A0B4J276 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms