Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV26-1A0A087WT03 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC15.94■□□□□ 0.14
TRAV26-1A0A087WT03 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
TRAV26-1A0A087WT03 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
TRAV26-1A0A087WT03 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
TRAV26-1A0A087WT03 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC15.94■□□□□ 0.14
TRAV26-1A0A087WT03 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV26-1A0A087WT03 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
TRAV26-1A0A087WT03 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV26-1A0A087WT03 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV26-1A0A087WT03 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV26-1A0A087WT03 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
TRAV26-1A0A087WT03 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
TRAV26-1A0A087WT03 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV26-1A0A087WT03 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC15.93■□□□□ 0.14
TRAV26-1A0A087WT03 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC15.93■□□□□ 0.14
TRAV26-1A0A087WT03 SRR-208ENST00000576848 588 ntTSL 4 BASIC15.93■□□□□ 0.14
TRAV26-1A0A087WT03 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC15.93■□□□□ 0.14
TRAV26-1A0A087WT03 EI24-213ENST00000618552 1747 ntTSL 5 BASIC15.93■□□□□ 0.14
TRAV26-1A0A087WT03 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV26-1A0A087WT03 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV26-1A0A087WT03 USF2-207ENST00000595068 1612 ntTSL 5 BASIC15.93■□□□□ 0.14
TRAV26-1A0A087WT03 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV26-1A0A087WT03 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC15.93■□□□□ 0.14
TRAV26-1A0A087WT03 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV26-1A0A087WT03 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV26-1A0A087WT03 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV26-1A0A087WT03 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV26-1A0A087WT03 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV26-1A0A087WT03 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV26-1A0A087WT03 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV26-1A0A087WT03 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV26-1A0A087WT03 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV26-1A0A087WT03 MIR3621-201ENST00000580529 85 ntBASIC15.92■□□□□ 0.14
TRAV26-1A0A087WT03 TRIR-202ENST00000588213 841 ntTSL 3 BASIC15.92■□□□□ 0.14
TRAV26-1A0A087WT03 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAV26-1A0A087WT03 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC15.92■□□□□ 0.14
TRAV26-1A0A087WT03 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV26-1A0A087WT03 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV26-1A0A087WT03 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
TRAV26-1A0A087WT03 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAV26-1A0A087WT03 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV26-1A0A087WT03 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
TRAV26-1A0A087WT03 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV26-1A0A087WT03 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV26-1A0A087WT03 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV26-1A0A087WT03 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV26-1A0A087WT03 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV26-1A0A087WT03 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV26-1A0A087WT03 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
TRAV26-1A0A087WT03 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
TRAV26-1A0A087WT03 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV26-1A0A087WT03 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV26-1A0A087WT03 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC15.91■□□□□ 0.14
TRAV26-1A0A087WT03 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC15.91■□□□□ 0.14
TRAV26-1A0A087WT03 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
TRAV26-1A0A087WT03 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV26-1A0A087WT03 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV26-1A0A087WT03 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV26-1A0A087WT03 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV26-1A0A087WT03 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV26-1A0A087WT03 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV26-1A0A087WT03 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV26-1A0A087WT03 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC15.9■□□□□ 0.14
TRAV26-1A0A087WT03 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC15.9■□□□□ 0.14
TRAV26-1A0A087WT03 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV26-1A0A087WT03 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC15.9■□□□□ 0.14
TRAV26-1A0A087WT03 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV26-1A0A087WT03 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC15.9■□□□□ 0.14
TRAV26-1A0A087WT03 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV26-1A0A087WT03 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV26-1A0A087WT03 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TRAV26-1A0A087WT03 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TRAV26-1A0A087WT03 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
TRAV26-1A0A087WT03 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV26-1A0A087WT03 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC15.89■□□□□ 0.13
TRAV26-1A0A087WT03 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
TRAV26-1A0A087WT03 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC15.89■□□□□ 0.13
TRAV26-1A0A087WT03 RPP21-222ENST00000433076 577 ntTSL 2 BASIC15.89■□□□□ 0.13
TRAV26-1A0A087WT03 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC15.89■□□□□ 0.13
TRAV26-1A0A087WT03 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC15.89■□□□□ 0.13
TRAV26-1A0A087WT03 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC15.89■□□□□ 0.13
TRAV26-1A0A087WT03 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV26-1A0A087WT03 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV26-1A0A087WT03 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV26-1A0A087WT03 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV26-1A0A087WT03 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV26-1A0A087WT03 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
TRAV26-1A0A087WT03 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV26-1A0A087WT03 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV26-1A0A087WT03 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV26-1A0A087WT03 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
TRAV26-1A0A087WT03 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC15.88■□□□□ 0.13
TRAV26-1A0A087WT03 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC15.88■□□□□ 0.13
TRAV26-1A0A087WT03 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAV26-1A0A087WT03 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC15.88■□□□□ 0.13
TRAV26-1A0A087WT03 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC15.88■□□□□ 0.13
TRAV26-1A0A087WT03 AC092667.1-201ENST00000434301 2586 ntBASIC15.88■□□□□ 0.13
TRAV26-1A0A087WT03 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV26-1A0A087WT03 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms