Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV9-1A0A075B6T8 RNF165-205ENST00000588679 2904 ntBASIC16.72■□□□□ 0.27
TRAV9-1A0A075B6T8 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC16.72■□□□□ 0.27
TRAV9-1A0A075B6T8 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV9-1A0A075B6T8 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV9-1A0A075B6T8 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV9-1A0A075B6T8 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC16.71■□□□□ 0.27
TRAV9-1A0A075B6T8 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC16.71■□□□□ 0.27
TRAV9-1A0A075B6T8 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV9-1A0A075B6T8 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV9-1A0A075B6T8 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV9-1A0A075B6T8 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV9-1A0A075B6T8 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV9-1A0A075B6T8 AC126177.7-201ENST00000547904 679 ntBASIC16.71■□□□□ 0.27
TRAV9-1A0A075B6T8 DUX4L28-201ENST00000623687 678 ntBASIC16.71■□□□□ 0.27
TRAV9-1A0A075B6T8 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
TRAV9-1A0A075B6T8 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
TRAV9-1A0A075B6T8 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV9-1A0A075B6T8 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV9-1A0A075B6T8 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC16.71■□□□□ 0.27
TRAV9-1A0A075B6T8 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC16.71■□□□□ 0.27
TRAV9-1A0A075B6T8 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV9-1A0A075B6T8 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV9-1A0A075B6T8 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TRAV9-1A0A075B6T8 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
TRAV9-1A0A075B6T8 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
TRAV9-1A0A075B6T8 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV9-1A0A075B6T8 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TRAV9-1A0A075B6T8 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
TRAV9-1A0A075B6T8 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV9-1A0A075B6T8 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV9-1A0A075B6T8 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC16.7■□□□□ 0.26
TRAV9-1A0A075B6T8 SUZ12P1-203ENST00000578195 985 ntBASIC16.7■□□□□ 0.26
TRAV9-1A0A075B6T8 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV9-1A0A075B6T8 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV9-1A0A075B6T8 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
TRAV9-1A0A075B6T8 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
TRAV9-1A0A075B6T8 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TRAV9-1A0A075B6T8 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV9-1A0A075B6T8 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC16.7■□□□□ 0.26
TRAV9-1A0A075B6T8 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV9-1A0A075B6T8 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TRAV9-1A0A075B6T8 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV9-1A0A075B6T8 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
TRAV9-1A0A075B6T8 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV9-1A0A075B6T8 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV9-1A0A075B6T8 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC16.69■□□□□ 0.26
TRAV9-1A0A075B6T8 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TRAV9-1A0A075B6T8 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV9-1A0A075B6T8 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
TRAV9-1A0A075B6T8 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV9-1A0A075B6T8 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC16.69■□□□□ 0.26
TRAV9-1A0A075B6T8 AC007952.6-201ENST00000573168 2673 ntBASIC16.69■□□□□ 0.26
TRAV9-1A0A075B6T8 AC003957.1-201ENST00000625108 2673 ntBASIC16.69■□□□□ 0.26
TRAV9-1A0A075B6T8 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV9-1A0A075B6T8 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC16.69■□□□□ 0.26
TRAV9-1A0A075B6T8 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV9-1A0A075B6T8 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV9-1A0A075B6T8 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
TRAV9-1A0A075B6T8 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC16.68■□□□□ 0.26
TRAV9-1A0A075B6T8 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC16.68■□□□□ 0.26
TRAV9-1A0A075B6T8 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV9-1A0A075B6T8 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC16.68■□□□□ 0.26
TRAV9-1A0A075B6T8 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV9-1A0A075B6T8 AC244015.2-201ENST00000616358 1861 ntBASIC16.68■□□□□ 0.26
TRAV9-1A0A075B6T8 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV9-1A0A075B6T8 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV9-1A0A075B6T8 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC16.68■□□□□ 0.26
TRAV9-1A0A075B6T8 CHST11-203ENST00000547956 936 ntTSL 2 BASIC16.68■□□□□ 0.26
TRAV9-1A0A075B6T8 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV9-1A0A075B6T8 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV9-1A0A075B6T8 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TRAV9-1A0A075B6T8 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV9-1A0A075B6T8 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV9-1A0A075B6T8 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV9-1A0A075B6T8 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC16.67■□□□□ 0.26
TRAV9-1A0A075B6T8 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV9-1A0A075B6T8 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV9-1A0A075B6T8 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
TRAV9-1A0A075B6T8 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV9-1A0A075B6T8 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TRAV9-1A0A075B6T8 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC16.67■□□□□ 0.26
TRAV9-1A0A075B6T8 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC16.67■□□□□ 0.26
TRAV9-1A0A075B6T8 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV9-1A0A075B6T8 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC16.66■□□□□ 0.26
TRAV9-1A0A075B6T8 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV9-1A0A075B6T8 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TRAV9-1A0A075B6T8 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV9-1A0A075B6T8 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV9-1A0A075B6T8 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV9-1A0A075B6T8 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV9-1A0A075B6T8 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV9-1A0A075B6T8 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV9-1A0A075B6T8 ADM-207ENST00000530439 1839 ntTSL 2 BASIC16.66■□□□□ 0.26
TRAV9-1A0A075B6T8 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV9-1A0A075B6T8 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV9-1A0A075B6T8 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
TRAV9-1A0A075B6T8 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TRAV9-1A0A075B6T8 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC16.65■□□□□ 0.26
TRAV9-1A0A075B6T8 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms