Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
SHROOM3Q8TF72 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SHROOM3Q8TF72 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.79□□□□□ -0.2
SHROOM3Q8TF72 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
SHROOM3Q8TF72 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SHROOM3Q8TF72 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SHROOM3Q8TF72 AC012358.2-201ENST00000430010 1434 ntBASIC13.79□□□□□ -0.2
SHROOM3Q8TF72 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SHROOM3Q8TF72 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SHROOM3Q8TF72 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.79□□□□□ -0.2
SHROOM3Q8TF72 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SHROOM3Q8TF72 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SHROOM3Q8TF72 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SHROOM3Q8TF72 LAIR1-204ENST00000391743 2735 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
SHROOM3Q8TF72 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SHROOM3Q8TF72 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
SHROOM3Q8TF72 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SHROOM3Q8TF72 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC13.78□□□□□ -0.2
SHROOM3Q8TF72 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SHROOM3Q8TF72 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SHROOM3Q8TF72 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SHROOM3Q8TF72 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
SHROOM3Q8TF72 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC13.78□□□□□ -0.2
SHROOM3Q8TF72 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SHROOM3Q8TF72 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SHROOM3Q8TF72 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SHROOM3Q8TF72 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC13.78□□□□□ -0.2
SHROOM3Q8TF72 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC13.78□□□□□ -0.2
SHROOM3Q8TF72 RN7SL396P-201ENST00000471086 295 ntBASIC13.78□□□□□ -0.2
SHROOM3Q8TF72 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
SHROOM3Q8TF72 DLK1-205ENST00000556051 469 ntTSL 2 BASIC13.78□□□□□ -0.2
SHROOM3Q8TF72 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC13.78□□□□□ -0.2
SHROOM3Q8TF72 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SHROOM3Q8TF72 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC13.78□□□□□ -0.2
SHROOM3Q8TF72 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SHROOM3Q8TF72 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SHROOM3Q8TF72 ITGB1BP1-201ENST00000238091 1772 ntTSL 3 BASIC13.78□□□□□ -0.2
SHROOM3Q8TF72 AC135506.1-201ENST00000603877 1799 ntBASIC13.78□□□□□ -0.2
SHROOM3Q8TF72 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC13.78□□□□□ -0.2
SHROOM3Q8TF72 POM121L14P-201ENST00000406100 1558 ntBASIC13.78□□□□□ -0.2
SHROOM3Q8TF72 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SHROOM3Q8TF72 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SHROOM3Q8TF72 CCDC149-208ENST00000635206 2362 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
SHROOM3Q8TF72 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SHROOM3Q8TF72 ARHGEF9-235ENST00000637723 2146 ntTSL 5 BASIC13.78□□□□□ -0.2
SHROOM3Q8TF72 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
SHROOM3Q8TF72 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC13.78□□□□□ -0.2
SHROOM3Q8TF72 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SHROOM3Q8TF72 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SHROOM3Q8TF72 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SHROOM3Q8TF72 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SHROOM3Q8TF72 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC13.78□□□□□ -0.2
SHROOM3Q8TF72 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC13.78□□□□□ -0.2
SHROOM3Q8TF72 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SHROOM3Q8TF72 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC13.78□□□□□ -0.2
SHROOM3Q8TF72 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SHROOM3Q8TF72 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
SHROOM3Q8TF72 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SHROOM3Q8TF72 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SHROOM3Q8TF72 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
SHROOM3Q8TF72 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SHROOM3Q8TF72 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SHROOM3Q8TF72 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SHROOM3Q8TF72 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.77□□□□□ -0.2
SHROOM3Q8TF72 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC13.77□□□□□ -0.2
SHROOM3Q8TF72 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.77□□□□□ -0.2
SHROOM3Q8TF72 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SHROOM3Q8TF72 ZNF771-204ENST00000566625 2415 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
SHROOM3Q8TF72 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SHROOM3Q8TF72 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
SHROOM3Q8TF72 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
SHROOM3Q8TF72 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SHROOM3Q8TF72 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
SHROOM3Q8TF72 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
SHROOM3Q8TF72 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
SHROOM3Q8TF72 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
SHROOM3Q8TF72 SERPING1-203ENST00000378323 1733 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.2
SHROOM3Q8TF72 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SHROOM3Q8TF72 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SHROOM3Q8TF72 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
SHROOM3Q8TF72 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
SHROOM3Q8TF72 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
SHROOM3Q8TF72 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
SHROOM3Q8TF72 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SHROOM3Q8TF72 HNRNPA1P58-201ENST00000403629 610 ntBASIC13.77□□□□□ -0.21
SHROOM3Q8TF72 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC13.77□□□□□ -0.21
SHROOM3Q8TF72 RPE-208ENST00000436630 1128 ntTSL 2 BASIC13.77□□□□□ -0.21
SHROOM3Q8TF72 AC022201.1-201ENST00000452525 577 ntTSL 4 BASIC13.77□□□□□ -0.21
SHROOM3Q8TF72 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC13.77□□□□□ -0.21
SHROOM3Q8TF72 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SHROOM3Q8TF72 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC13.77□□□□□ -0.21
SHROOM3Q8TF72 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC13.77□□□□□ -0.21
SHROOM3Q8TF72 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SHROOM3Q8TF72 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC13.77□□□□□ -0.21
SHROOM3Q8TF72 AP000553.2-201ENST00000609038 441 ntBASIC13.77□□□□□ -0.21
SHROOM3Q8TF72 AC018695.6-201ENST00000614011 534 ntBASIC13.77□□□□□ -0.21
SHROOM3Q8TF72 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC13.77□□□□□ -0.21
SHROOM3Q8TF72 ESR1-214ENST00000638569 132 ntTSL 5 BASIC13.77□□□□□ -0.21
SHROOM3Q8TF72 MRRF-201ENST00000297908 1841 ntTSL 2 BASIC13.77□□□□□ -0.21
SHROOM3Q8TF72 AL031587.5-201ENST00000624344 1849 ntBASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms