Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 KLK3-207ENST00000595952 969 ntTSL 3 BASIC8.56□□□□□ -1.04
PCP4P48539 HLA-A-209ENST00000638375 975 ntBASIC8.56□□□□□ -1.04
PCP4P48539 COL28A1-201ENST00000399429 4277 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
PCP4P48539 SLC24A3-202ENST00000613834 3694 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
PCP4P48539 RCAN1-210ENST00000487990 2520 ntTSL 2 BASIC8.56□□□□□ -1.04
PCP4P48539 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
PCP4P48539 PCDHA10-203ENST00000562220 12358 ntBASIC8.56□□□□□ -1.04
PCP4P48539 E2F8-202ENST00000527884 3432 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
PCP4P48539 RAB39B-201ENST00000369454 3505 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
PCP4P48539 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
PCP4P48539 RIPOR1-201ENST00000042381 4051 ntAPPRIS P3 TSL 5 BASIC8.56□□□□□ -1.04
PCP4P48539 PADI6-201ENST00000619609 2396 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
PCP4P48539 ZC3H7A-201ENST00000355758 3825 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
PCP4P48539 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC8.56□□□□□ -1.04
PCP4P48539 ERG-204ENST00000398907 4809 ntTSL 5 BASIC8.56□□□□□ -1.04
PCP4P48539 MPI-202ENST00000352410 5828 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
PCP4P48539 CHD3-202ENST00000358181 7286 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
PCP4P48539 LRRC27-204ENST00000368614 6374 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
PCP4P48539 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC8.56□□□□□ -1.04
PCP4P48539 COL6A3-205ENST00000392004 4037 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
PCP4P48539 APPL2-202ENST00000539978 2680 ntTSL 2 BASIC8.56□□□□□ -1.04
PCP4P48539 IL18R1-201ENST00000233957 3661 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
PCP4P48539 KIAA0930-202ENST00000336156 8119 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
PCP4P48539 IL16-201ENST00000302987 3999 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
PCP4P48539 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
PCP4P48539 TRPM3-203ENST00000358082 4710 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
PCP4P48539 TRPM3-213ENST00000396285 4701 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
PCP4P48539 TRPM3-214ENST00000396292 4740 ntAPPRIS P4 TSL 5 BASIC8.55□□□□□ -1.04
PCP4P48539 TRPM3-215ENST00000408909 4701 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
PCP4P48539 GP2-202ENST00000341642 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
PCP4P48539 AL512662.2-201ENST00000453174 1963 ntTSL 2 BASIC8.55□□□□□ -1.04
PCP4P48539 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
PCP4P48539 AKAP1-204ENST00000539273 3153 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
PCP4P48539 MAGED1-204ENST00000375772 2701 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
PCP4P48539 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
PCP4P48539 AC108120.3-201ENST00000505953 1510 ntBASIC8.55□□□□□ -1.04
PCP4P48539 LINC01115-202ENST00000621134 1519 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
PCP4P48539 AC004893.2-201ENST00000360902 3398 ntTSL 2 BASIC8.55□□□□□ -1.04
PCP4P48539 TRAK2-201ENST00000332624 6510 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
PCP4P48539 TUBB-207ENST00000396384 2823 ntTSL 3 BASIC8.55□□□□□ -1.04
PCP4P48539 TRAP1-201ENST00000246957 2296 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
PCP4P48539 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC8.55□□□□□ -1.04
PCP4P48539 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
PCP4P48539 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
PCP4P48539 RNF214-205ENST00000531287 1706 ntTSL 2 BASIC8.55□□□□□ -1.04
PCP4P48539 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC8.55□□□□□ -1.04
PCP4P48539 AC138869.3-201ENST00000563960 2486 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
PCP4P48539 WDR76-201ENST00000263795 3978 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
PCP4P48539 MAGEA9B-203ENST00000595065 1807 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
PCP4P48539 AK7-201ENST00000267584 3300 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
PCP4P48539 ZMYND8-212ENST00000458360 3729 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
PCP4P48539 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
PCP4P48539 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
PCP4P48539 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
PCP4P48539 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
PCP4P48539 COX5BP2-201ENST00000392354 334 ntBASIC8.55□□□□□ -1.04
PCP4P48539 SEPT7P2-202ENST00000398921 823 ntBASIC8.55□□□□□ -1.04
PCP4P48539 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC8.55□□□□□ -1.04
PCP4P48539 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC8.55□□□□□ -1.04
PCP4P48539 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC8.55□□□□□ -1.04
PCP4P48539 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC8.55□□□□□ -1.04
PCP4P48539 ZNRF2P2-203ENST00000454624 420 ntBASIC8.55□□□□□ -1.04
PCP4P48539 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
PCP4P48539 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC8.55□□□□□ -1.04
PCP4P48539 CD7-202ENST00000578509 925 ntTSL 3 BASIC8.55□□□□□ -1.04
PCP4P48539 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC8.55□□□□□ -1.04
PCP4P48539 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
PCP4P48539 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
PCP4P48539 IL11-204ENST00000590625 1028 ntTSL 2 BASIC8.55□□□□□ -1.04
PCP4P48539 GPATCH8-208ENST00000591680 4692 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
PCP4P48539 AL121992.3-201ENST00000606186 346 ntBASIC8.55□□□□□ -1.04
PCP4P48539 MYT1-205ENST00000622439 2140 ntTSL 5 BASIC8.55□□□□□ -1.04
PCP4P48539 PGK1-201ENST00000373316 4887 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
PCP4P48539 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
PCP4P48539 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC8.55□□□□□ -1.04
PCP4P48539 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
PCP4P48539 TEX2-208ENST00000584379 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC8.55□□□□□ -1.04
PCP4P48539 AC005831.1-201ENST00000624384 1697 ntBASIC8.55□□□□□ -1.04
PCP4P48539 ATP2B2-201ENST00000352432 8593 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
PCP4P48539 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
PCP4P48539 ZNF805-202ENST00000414468 1884 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
PCP4P48539 SNX29P2-202ENST00000507381 1857 ntTSL 5 BASIC8.55□□□□□ -1.04
PCP4P48539 ZNF442-201ENST00000242804 6219 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
PCP4P48539 SCNN1B-201ENST00000307331 2085 ntTSL 5 BASIC8.55□□□□□ -1.04
PCP4P48539 LINC02533-201ENST00000563079 2272 ntTSL 4 BASIC8.55□□□□□ -1.04
PCP4P48539 FKBP9P1-202ENST00000455909 2451 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
PCP4P48539 MEF2C-203ENST00000437473 4340 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
PCP4P48539 CEP192-202ENST00000430049 3286 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
PCP4P48539 ERMAP-202ENST00000372514 3369 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
PCP4P48539 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
PCP4P48539 CDH7-202ENST00000397968 12231 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PCP4P48539 STEAP3-203ENST00000393110 4262 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
PCP4P48539 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC8.54□□□□□ -1.04
PCP4P48539 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PCP4P48539 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
PCP4P48539 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC8.54□□□□□ -1.04
PCP4P48539 NRF1-204ENST00000393230 3523 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PCP4P48539 MYOM1-202ENST00000356443 5847 ntAPPRIS P4 TSL 1 (best) BASIC8.54□□□□□ -1.04
PCP4P48539 FAM129A-201ENST00000367511 6928 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PCP4P48539 COL25A1-208ENST00000610288 4799 ntTSL 5 BASIC8.54□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms