Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC12.56□□□□□ -0.4
CLDN20P56880 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLDN20P56880 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLDN20P56880 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLDN20P56880 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CLDN20P56880 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLDN20P56880 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLDN20P56880 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC12.56□□□□□ -0.4
CLDN20P56880 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CLDN20P56880 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLDN20P56880 LINC00567-201ENST00000569854 3409 ntBASIC12.56□□□□□ -0.4
CLDN20P56880 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
CLDN20P56880 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CLDN20P56880 C2-209ENST00000452323 1999 ntTSL 2 BASIC12.56□□□□□ -0.4
CLDN20P56880 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC12.56□□□□□ -0.4
CLDN20P56880 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLDN20P56880 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC12.55□□□□□ -0.4
CLDN20P56880 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CLDN20P56880 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CLDN20P56880 ODCP-201ENST00000459650 1639 ntBASIC12.55□□□□□ -0.4
CLDN20P56880 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CLDN20P56880 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC12.55□□□□□ -0.4
CLDN20P56880 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
CLDN20P56880 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
CLDN20P56880 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CLDN20P56880 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC12.55□□□□□ -0.4
CLDN20P56880 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CLDN20P56880 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CLDN20P56880 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CLDN20P56880 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
CLDN20P56880 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
CLDN20P56880 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CLDN20P56880 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
CLDN20P56880 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC12.55□□□□□ -0.4
CLDN20P56880 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CLDN20P56880 RPL3P2-204ENST00000413027 1203 ntBASIC12.55□□□□□ -0.4
CLDN20P56880 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC12.55□□□□□ -0.4
CLDN20P56880 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC12.55□□□□□ -0.4
CLDN20P56880 AC092573.1-201ENST00000433054 884 ntBASIC12.55□□□□□ -0.4
CLDN20P56880 AC003958.1-201ENST00000435883 421 ntBASIC12.55□□□□□ -0.4
CLDN20P56880 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC12.55□□□□□ -0.4
CLDN20P56880 AC098935.1-201ENST00000446057 611 ntBASIC12.55□□□□□ -0.4
CLDN20P56880 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC12.55□□□□□ -0.4
CLDN20P56880 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC12.55□□□□□ -0.4
CLDN20P56880 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC12.55□□□□□ -0.4
CLDN20P56880 CD81-209ENST00000492627 886 ntTSL 3 BASIC12.55□□□□□ -0.4
CLDN20P56880 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC12.55□□□□□ -0.4
CLDN20P56880 RNA5SP417-201ENST00000516459 108 ntBASIC12.55□□□□□ -0.4
CLDN20P56880 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CLDN20P56880 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CLDN20P56880 RN7SL190P-201ENST00000582519 257 ntBASIC12.55□□□□□ -0.4
CLDN20P56880 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CLDN20P56880 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC12.55□□□□□ -0.4
CLDN20P56880 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC12.55□□□□□ -0.4
CLDN20P56880 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
CLDN20P56880 AC107464.3-201ENST00000609172 737 ntBASIC12.55□□□□□ -0.4
CLDN20P56880 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
CLDN20P56880 COX6A1P2-201ENST00000620597 330 ntBASIC12.55□□□□□ -0.4
CLDN20P56880 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CLDN20P56880 CR392039.2-201ENST00000623182 509 ntBASIC12.55□□□□□ -0.4
CLDN20P56880 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC12.55□□□□□ -0.4
CLDN20P56880 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CLDN20P56880 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CLDN20P56880 GOLGA8UP-201ENST00000527159 1755 ntBASIC12.55□□□□□ -0.4
CLDN20P56880 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
CLDN20P56880 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
CLDN20P56880 AC027369.3-201ENST00000530465 3707 ntBASIC12.55□□□□□ -0.4
CLDN20P56880 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC12.55□□□□□ -0.4
CLDN20P56880 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CLDN20P56880 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CLDN20P56880 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
CLDN20P56880 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CLDN20P56880 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CLDN20P56880 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
CLDN20P56880 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CLDN20P56880 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CLDN20P56880 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CLDN20P56880 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC12.55□□□□□ -0.4
CLDN20P56880 MIR193BHG-211ENST00000641433 5365 ntBASIC12.55□□□□□ -0.4
CLDN20P56880 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC12.54□□□□□ -0.4
CLDN20P56880 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CLDN20P56880 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CLDN20P56880 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CLDN20P56880 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CLDN20P56880 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CLDN20P56880 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CLDN20P56880 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC12.54□□□□□ -0.4
CLDN20P56880 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CLDN20P56880 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
CLDN20P56880 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CLDN20P56880 AL021155.1-201ENST00000438808 2637 ntBASIC12.54□□□□□ -0.4
CLDN20P56880 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CLDN20P56880 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC12.54□□□□□ -0.4
CLDN20P56880 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CLDN20P56880 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CLDN20P56880 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CLDN20P56880 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CLDN20P56880 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CLDN20P56880 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC12.54□□□□□ -0.4
CLDN20P56880 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms