Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 SLC35A2-203ENST00000376515 1044 ntTSL 3 BASIC14.22□□□□□ -0.13
MTHFRP42898 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
MTHFRP42898 NR2C2AP-202ENST00000420605 859 ntTSL 2 BASIC14.22□□□□□ -0.13
MTHFRP42898 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MTHFRP42898 AC092865.2-201ENST00000439409 971 ntBASIC14.22□□□□□ -0.13
MTHFRP42898 RNF181-203ENST00000441634 844 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
MTHFRP42898 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
MTHFRP42898 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC14.22□□□□□ -0.13
MTHFRP42898 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC14.22□□□□□ -0.13
MTHFRP42898 SLC13A2-205ENST00000545060 1276 ntTSL 5 BASIC14.22□□□□□ -0.13
MTHFRP42898 METTL7AP1-201ENST00000547343 496 ntBASIC14.22□□□□□ -0.13
MTHFRP42898 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC14.22□□□□□ -0.13
MTHFRP42898 ECSIT-211ENST00000592312 1286 ntTSL 5 BASIC14.22□□□□□ -0.13
MTHFRP42898 AP001462.1-201ENST00000594089 452 ntBASIC14.22□□□□□ -0.13
MTHFRP42898 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
MTHFRP42898 AC004466.2-201ENST00000614749 516 ntBASIC14.22□□□□□ -0.13
MTHFRP42898 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
MTHFRP42898 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.22□□□□□ -0.13
MTHFRP42898 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MTHFRP42898 OSCP1-201ENST00000235532 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MTHFRP42898 OSCP1-203ENST00000356637 1463 ntTSL 5 BASIC14.22□□□□□ -0.13
MTHFRP42898 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MTHFRP42898 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MTHFRP42898 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MTHFRP42898 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MTHFRP42898 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MTHFRP42898 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
MTHFRP42898 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
MTHFRP42898 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MTHFRP42898 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
MTHFRP42898 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MTHFRP42898 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MTHFRP42898 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC14.22□□□□□ -0.13
MTHFRP42898 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
MTHFRP42898 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
MTHFRP42898 PTN-202ENST00000393083 1599 ntTSL 5 BASIC14.22□□□□□ -0.13
MTHFRP42898 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC14.22□□□□□ -0.13
MTHFRP42898 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.22□□□□□ -0.13
MTHFRP42898 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MTHFRP42898 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
MTHFRP42898 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MTHFRP42898 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MTHFRP42898 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
MTHFRP42898 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
MTHFRP42898 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MTHFRP42898 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MTHFRP42898 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
MTHFRP42898 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
MTHFRP42898 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
MTHFRP42898 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
MTHFRP42898 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
MTHFRP42898 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
MTHFRP42898 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
MTHFRP42898 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC14.21□□□□□ -0.13
MTHFRP42898 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC14.21□□□□□ -0.13
MTHFRP42898 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MTHFRP42898 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MTHFRP42898 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
MTHFRP42898 FOLR1-204ENST00000393681 1061 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MTHFRP42898 OLA1P2-201ENST00000395519 1264 ntBASIC14.21□□□□□ -0.13
MTHFRP42898 TUBB2BP1-201ENST00000404155 871 ntBASIC14.21□□□□□ -0.13
MTHFRP42898 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC14.21□□□□□ -0.13
MTHFRP42898 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
MTHFRP42898 AF186996.6-201ENST00000485294 149 ntBASIC14.21□□□□□ -0.13
MTHFRP42898 RPL29P2-202ENST00000498671 657 ntBASIC14.21□□□□□ -0.13
MTHFRP42898 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC14.21□□□□□ -0.13
MTHFRP42898 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
MTHFRP42898 MIR3940-201ENST00000579148 102 ntBASIC14.21□□□□□ -0.13
MTHFRP42898 AC091132.6-201ENST00000586411 826 ntTSL 5 BASIC14.21□□□□□ -0.13
MTHFRP42898 CSAG3-201ENST00000599845 844 ntAPPRIS P5 TSL 1 (best) BASIC14.21□□□□□ -0.13
MTHFRP42898 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC14.21□□□□□ -0.13
MTHFRP42898 CSAG2-203ENST00000638741 844 ntAPPRIS P5 TSL 1 (best) BASIC14.21□□□□□ -0.13
MTHFRP42898 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC14.21□□□□□ -0.13
MTHFRP42898 TP73-201ENST00000346387 4854 ntTSL 5 BASIC14.21□□□□□ -0.13
MTHFRP42898 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MTHFRP42898 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MTHFRP42898 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
MTHFRP42898 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
MTHFRP42898 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC14.21□□□□□ -0.13
MTHFRP42898 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC14.21□□□□□ -0.13
MTHFRP42898 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
MTHFRP42898 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
MTHFRP42898 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
MTHFRP42898 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.21□□□□□ -0.14
MTHFRP42898 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
MTHFRP42898 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
MTHFRP42898 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
MTHFRP42898 TTC23L-203ENST00000505624 1353 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
MTHFRP42898 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
MTHFRP42898 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC14.21□□□□□ -0.14
MTHFRP42898 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
MTHFRP42898 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
MTHFRP42898 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
MTHFRP42898 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.2□□□□□ -0.14
MTHFRP42898 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
MTHFRP42898 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
MTHFRP42898 SULT1A2-202ENST00000395630 1322 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
MTHFRP42898 AF013593.1-201ENST00000458074 1487 ntBASIC14.2□□□□□ -0.14
MTHFRP42898 AC061965.1-201ENST00000560524 1465 ntBASIC14.2□□□□□ -0.14
MTHFRP42898 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms