Protein–RNA interactions for Protein: P10147

CCL3, C-C motif chemokine 3, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3P10147 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCL3P10147 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCL3P10147 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCL3P10147 AMHR2-204ENST00000550311 1787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCL3P10147 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCL3P10147 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCL3P10147 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCL3P10147 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CCL3P10147 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CCL3P10147 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCL3P10147 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCL3P10147 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
CCL3P10147 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
CCL3P10147 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCL3P10147 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
CCL3P10147 PCDHA5-203ENST00000614258 4248 ntBASIC12.35□□□□□ -0.43
CCL3P10147 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC12.35□□□□□ -0.43
CCL3P10147 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL3P10147 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CCL3P10147 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CCL3P10147 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CCL3P10147 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CCL3P10147 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL3P10147 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL3P10147 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL3P10147 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL3P10147 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL3P10147 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CCL3P10147 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL3P10147 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CCL3P10147 AC064850.1-201ENST00000413279 1398 ntBASIC12.34□□□□□ -0.43
CCL3P10147 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL3P10147 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC12.34□□□□□ -0.43
CCL3P10147 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL3P10147 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL3P10147 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CCL3P10147 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL3P10147 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL3P10147 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC12.34□□□□□ -0.43
CCL3P10147 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL3P10147 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC12.34□□□□□ -0.43
CCL3P10147 SERF2-206ENST00000409291 807 ntTSL 3 BASIC12.34□□□□□ -0.43
CCL3P10147 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC12.34□□□□□ -0.43
CCL3P10147 HCG27-204ENST00000424675 895 ntTSL 3 BASIC12.34□□□□□ -0.43
CCL3P10147 PGK1P2-201ENST00000431702 1214 ntBASIC12.34□□□□□ -0.43
CCL3P10147 VENTXP4-201ENST00000449029 958 ntBASIC12.34□□□□□ -0.43
CCL3P10147 KRT18P66-201ENST00000452970 1269 ntBASIC12.34□□□□□ -0.43
CCL3P10147 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC12.34□□□□□ -0.43
CCL3P10147 PTK2-225ENST00000520892 571 ntTSL 4 BASIC12.34□□□□□ -0.43
CCL3P10147 AC078814.4-201ENST00000546650 327 ntBASIC12.34□□□□□ -0.43
CCL3P10147 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC12.34□□□□□ -0.43
CCL3P10147 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC12.34□□□□□ -0.43
CCL3P10147 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC12.34□□□□□ -0.43
CCL3P10147 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL3P10147 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC12.34□□□□□ -0.43
CCL3P10147 KF455155.1-201ENST00000604493 303 ntBASIC12.34□□□□□ -0.43
CCL3P10147 URAHP-205ENST00000610227 398 ntBASIC12.34□□□□□ -0.43
CCL3P10147 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC12.34□□□□□ -0.43
CCL3P10147 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC12.34□□□□□ -0.43
CCL3P10147 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL3P10147 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL3P10147 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC12.34□□□□□ -0.43
CCL3P10147 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL3P10147 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL3P10147 PTCD2-207ENST00000503868 1653 ntTSL 2 BASIC12.34□□□□□ -0.43
CCL3P10147 LINC00943-204ENST00000537374 1688 ntTSL 5 BASIC12.34□□□□□ -0.43
CCL3P10147 RMND5B-212ENST00000542098 1681 ntTSL 5 BASIC12.34□□□□□ -0.43
CCL3P10147 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL3P10147 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL3P10147 MEIS2-215ENST00000559561 1442 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
CCL3P10147 AP000437.1-201ENST00000624057 2085 ntBASIC12.34□□□□□ -0.43
CCL3P10147 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL3P10147 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CCL3P10147 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL3P10147 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL3P10147 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL3P10147 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC12.34□□□□□ -0.43
CCL3P10147 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CCL3P10147 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CCL3P10147 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL3P10147 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL3P10147 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL3P10147 MSNP1-201ENST00000511640 1732 ntBASIC12.34□□□□□ -0.43
CCL3P10147 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC12.34□□□□□ -0.43
CCL3P10147 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
CCL3P10147 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC12.34□□□□□ -0.43
CCL3P10147 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CCL3P10147 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CCL3P10147 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
CCL3P10147 NME1-209ENST00000511355 1645 ntTSL 5 BASIC12.33□□□□□ -0.43
CCL3P10147 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
CCL3P10147 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC12.33□□□□□ -0.43
CCL3P10147 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC12.33□□□□□ -0.44
CCL3P10147 AC018904.2-201ENST00000561202 1757 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CCL3P10147 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC12.33□□□□□ -0.44
CCL3P10147 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL3P10147 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL3P10147 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
CCL3P10147 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL3P10147 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms