Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 VWA8-203ENST00000379310 7147 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
RCL1Q9Y2P8 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
RCL1Q9Y2P8 LMCD1-201ENST00000157600 8405 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 AC144522.1-201ENST00000625111 1658 ntBASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 OSBPL7-202ENST00000392507 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 PLA2G4E-AS1-201ENST00000499478 2499 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 LINC01624-203ENST00000607074 3265 ntTSL 2 BASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 SP7-202ENST00000536324 3151 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 DGCR5-203ENST00000438934 5492 ntTSL 5 BASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 WDR62-203ENST00000401500 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 UGT1A5-201ENST00000373414 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 KCTD21-AS1-207ENST00000600795 1549 ntBASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 ANKRD26-202ENST00000436985 6827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 CLTC-202ENST00000393043 5292 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 ALDH1A2-204ENST00000537372 3700 ntTSL 2 BASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 SCRN1-207ENST00000434476 1454 ntTSL 2 BASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 TARS2-205ENST00000438568 2188 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 PDE5A-202ENST00000354960 7154 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 UMODL1-205ENST00000408910 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 GAS8-220ENST00000620723 3308 ntTSL 2 BASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 TRIM21-201ENST00000254436 1924 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 EBF2-203ENST00000520164 5145 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 POM121L10P-201ENST00000436994 1285 ntBASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 LINC01428-201ENST00000449581 874 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 C3orf35-206ENST00000452017 513 ntAPPRIS P5 TSL 5 BASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 UGT1A2P-201ENST00000454886 866 ntBASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 MIR4783-201ENST00000580343 82 ntBASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 CENPX-208ENST00000584347 799 ntTSL 2 BASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 AC010319.3-201ENST00000597028 470 ntBASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 AC006538.3-201ENST00000612495 578 ntBASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 AC138951.2-201ENST00000623455 1161 ntBASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 API5-208ENST00000531273 1868 ntTSL 2 BASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 PHYHIP-201ENST00000321613 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 CSPG4P13-202ENST00000567704 4801 ntBASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 COL11A1-210ENST00000512756 5442 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 CACNA1C-219ENST00000399649 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 AP002986.1-201ENST00000602376 1763 ntTSL 5 BASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 B3GAT2-202ENST00000615536 5206 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 POFUT2-203ENST00000349485 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 CILP-201ENST00000261883 5695 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 OSTM1-AS1-202ENST00000441184 3334 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 NR4A1-201ENST00000243050 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 AMACR-201ENST00000335606 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 FAM214B-204ENST00000378566 2566 ntTSL 2 BASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 IQSEC1-204ENST00000613206 3582 ntTSL 2 BASIC11.2□□□□□ -0.62
RCL1Q9Y2P8 PTCH1-207ENST00000429896 6563 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 PICART1-201ENST00000499842 2533 ntTSL 2 BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 MYH3-205ENST00000583535 6037 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 CYP4F11-201ENST00000248041 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 FAM90A17P-201ENST00000533716 1957 ntBASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 AC024560.1-201ENST00000424493 1471 ntTSL 3 BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 AF013593.1-201ENST00000458074 1487 ntBASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 RBMXL3-201ENST00000424776 3442 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 CYP4F11-205ENST00000620614 2908 ntTSL 5 BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 SLCO2A1-208ENST00000493729 1918 ntTSL 5 BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 EGFLAM-204ENST00000397202 2398 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 AL356966.1-201ENST00000454752 2367 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 GOLGA6L7P-201ENST00000567390 2397 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 C1orf216-201ENST00000270815 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 HPSE2-201ENST00000370546 1849 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 CDC42-202ENST00000344548 2256 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 SLC5A11-201ENST00000347898 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 MKL1-205ENST00000407029 4091 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 AC005696.4-201ENST00000614400 3147 ntBASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 AC099786.2-201ENST00000427892 2203 ntTSL 2 BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 SV2A-202ENST00000369146 4416 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 KRT18P28-201ENST00000453838 1332 ntBASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms