Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC14.56□□□□□ -0.08
CTC1Q2NKJ3 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CTC1Q2NKJ3 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CTC1Q2NKJ3 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CTC1Q2NKJ3 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.56□□□□□ -0.08
CTC1Q2NKJ3 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
CTC1Q2NKJ3 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CTC1Q2NKJ3 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CTC1Q2NKJ3 MIR1307-201ENST00000408840 149 ntBASIC14.56□□□□□ -0.08
CTC1Q2NKJ3 AC011284.1-201ENST00000427920 856 ntTSL 4 BASIC14.56□□□□□ -0.08
CTC1Q2NKJ3 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC14.56□□□□□ -0.08
CTC1Q2NKJ3 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CTC1Q2NKJ3 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CTC1Q2NKJ3 EIF2S2P5-201ENST00000457635 968 ntBASIC14.56□□□□□ -0.08
CTC1Q2NKJ3 TPT1P6-201ENST00000458298 514 ntBASIC14.56□□□□□ -0.08
CTC1Q2NKJ3 AC092910.2-201ENST00000491262 348 ntBASIC14.56□□□□□ -0.08
CTC1Q2NKJ3 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC14.56□□□□□ -0.08
CTC1Q2NKJ3 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC14.56□□□□□ -0.08
CTC1Q2NKJ3 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC14.56□□□□□ -0.08
CTC1Q2NKJ3 RN7SL480P-201ENST00000581481 294 ntBASIC14.56□□□□□ -0.08
CTC1Q2NKJ3 AC132812.1-201ENST00000583145 892 ntBASIC14.56□□□□□ -0.08
CTC1Q2NKJ3 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CTC1Q2NKJ3 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CTC1Q2NKJ3 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CTC1Q2NKJ3 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CTC1Q2NKJ3 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CTC1Q2NKJ3 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CTC1Q2NKJ3 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CTC1Q2NKJ3 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CTC1Q2NKJ3 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CTC1Q2NKJ3 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CTC1Q2NKJ3 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CTC1Q2NKJ3 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CTC1Q2NKJ3 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CTC1Q2NKJ3 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CTC1Q2NKJ3 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CTC1Q2NKJ3 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CTC1Q2NKJ3 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC14.56□□□□□ -0.08
CTC1Q2NKJ3 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CTC1Q2NKJ3 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
CTC1Q2NKJ3 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CTC1Q2NKJ3 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CTC1Q2NKJ3 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC14.55□□□□□ -0.08
CTC1Q2NKJ3 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.55□□□□□ -0.08
CTC1Q2NKJ3 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CTC1Q2NKJ3 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CTC1Q2NKJ3 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CTC1Q2NKJ3 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CTC1Q2NKJ3 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CTC1Q2NKJ3 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CTC1Q2NKJ3 HSPA8P5-201ENST00000456928 2069 ntBASIC14.55□□□□□ -0.08
CTC1Q2NKJ3 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CTC1Q2NKJ3 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CTC1Q2NKJ3 KRT18P44-201ENST00000416086 1285 ntBASIC14.55□□□□□ -0.08
CTC1Q2NKJ3 PHBP10-201ENST00000416467 784 ntBASIC14.55□□□□□ -0.08
CTC1Q2NKJ3 AC010086.2-201ENST00000428616 226 ntBASIC14.55□□□□□ -0.08
CTC1Q2NKJ3 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC14.55□□□□□ -0.08
CTC1Q2NKJ3 HNRNPA1P10-201ENST00000444945 962 ntBASIC14.55□□□□□ -0.08
CTC1Q2NKJ3 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC14.55□□□□□ -0.08
CTC1Q2NKJ3 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC14.55□□□□□ -0.08
CTC1Q2NKJ3 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC14.55□□□□□ -0.08
CTC1Q2NKJ3 GOSR1-204ENST00000451249 1231 ntAPPRIS ALT1 TSL 2 BASIC14.55□□□□□ -0.08
CTC1Q2NKJ3 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC14.55□□□□□ -0.08
CTC1Q2NKJ3 RN7SL523P-201ENST00000484401 298 ntBASIC14.55□□□□□ -0.08
CTC1Q2NKJ3 AC097381.2-201ENST00000510640 859 ntTSL 2 BASIC14.55□□□□□ -0.08
CTC1Q2NKJ3 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC14.55□□□□□ -0.08
CTC1Q2NKJ3 AC142086.5-202ENST00000562500 217 ntBASIC14.55□□□□□ -0.08
CTC1Q2NKJ3 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CTC1Q2NKJ3 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.55□□□□□ -0.08
CTC1Q2NKJ3 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CTC1Q2NKJ3 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CTC1Q2NKJ3 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CTC1Q2NKJ3 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CTC1Q2NKJ3 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CTC1Q2NKJ3 AL050341.2-201ENST00000567508 1541 ntBASIC14.55□□□□□ -0.08
CTC1Q2NKJ3 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC14.55□□□□□ -0.08
CTC1Q2NKJ3 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC14.55□□□□□ -0.08
CTC1Q2NKJ3 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
CTC1Q2NKJ3 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CTC1Q2NKJ3 AP002761.4-201ENST00000565433 3361 ntBASIC14.54□□□□□ -0.08
CTC1Q2NKJ3 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CTC1Q2NKJ3 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.54□□□□□ -0.08
CTC1Q2NKJ3 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CTC1Q2NKJ3 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC14.54□□□□□ -0.08
CTC1Q2NKJ3 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CTC1Q2NKJ3 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CTC1Q2NKJ3 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CTC1Q2NKJ3 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CTC1Q2NKJ3 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CTC1Q2NKJ3 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CTC1Q2NKJ3 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
CTC1Q2NKJ3 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC14.54□□□□□ -0.08
CTC1Q2NKJ3 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CTC1Q2NKJ3 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CTC1Q2NKJ3 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CTC1Q2NKJ3 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CTC1Q2NKJ3 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CTC1Q2NKJ3 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CTC1Q2NKJ3 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CTC1Q2NKJ3 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms