Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 ERCC6L2-201ENST00000288985 4564 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLK1P49759 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC12.96□□□□□ -0.33
CLK1P49759 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC12.96□□□□□ -0.33
CLK1P49759 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC12.96□□□□□ -0.34
CLK1P49759 NFAT5-209ENST00000567239 6376 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CLK1P49759 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC12.96□□□□□ -0.34
CLK1P49759 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CLK1P49759 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
CLK1P49759 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CLK1P49759 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC12.96□□□□□ -0.34
CLK1P49759 KCNMA1-208ENST00000372440 3849 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
CLK1P49759 KCNMA1-227ENST00000638203 3840 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
CLK1P49759 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
CLK1P49759 KCNMA1-233ENST00000638351 3849 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
CLK1P49759 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CLK1P49759 AC110048.1-201ENST00000604293 2157 ntBASIC12.96□□□□□ -0.34
CLK1P49759 RALGAPB-201ENST00000262879 8663 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLK1P49759 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLK1P49759 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLK1P49759 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLK1P49759 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC12.95□□□□□ -0.34
CLK1P49759 ERI1-209ENST00000523898 5036 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
CLK1P49759 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLK1P49759 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC12.95□□□□□ -0.34
CLK1P49759 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
CLK1P49759 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
CLK1P49759 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLK1P49759 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLK1P49759 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC12.95□□□□□ -0.34
CLK1P49759 GFRA1-204ENST00000439649 9216 ntAPPRIS P3 TSL 2 BASIC12.95□□□□□ -0.34
CLK1P49759 AC012531.1-201ENST00000562848 2680 ntBASIC12.95□□□□□ -0.34
CLK1P49759 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLK1P49759 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CLK1P49759 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC12.95□□□□□ -0.34
CLK1P49759 JTB-202ENST00000356648 1040 ntTSL 2 BASIC12.95□□□□□ -0.34
CLK1P49759 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
CLK1P49759 AC103592.1-201ENST00000394513 664 ntBASIC12.95□□□□□ -0.34
CLK1P49759 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC12.95□□□□□ -0.34
CLK1P49759 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC12.95□□□□□ -0.34
CLK1P49759 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC12.95□□□□□ -0.34
CLK1P49759 AC011742.3-201ENST00000439053 820 ntBASIC12.95□□□□□ -0.34
CLK1P49759 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC12.95□□□□□ -0.34
CLK1P49759 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC12.95□□□□□ -0.34
CLK1P49759 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC12.95□□□□□ -0.34
CLK1P49759 OARD1-212ENST00000482515 832 ntTSL 2 BASIC12.95□□□□□ -0.34
CLK1P49759 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC12.95□□□□□ -0.34
CLK1P49759 SKA2-205ENST00000580541 689 ntTSL 3 BASIC12.95□□□□□ -0.34
CLK1P49759 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC12.95□□□□□ -0.34
CLK1P49759 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC12.95□□□□□ -0.34
CLK1P49759 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC12.95□□□□□ -0.34
CLK1P49759 AC138649.2-201ENST00000615886 705 ntBASIC12.95□□□□□ -0.34
CLK1P49759 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC12.95□□□□□ -0.34
CLK1P49759 AC092299.1-201ENST00000632679 757 ntBASIC12.95□□□□□ -0.34
CLK1P49759 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLK1P49759 CACUL1-201ENST00000369151 11311 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLK1P49759 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
CLK1P49759 PCDHB17P-202ENST00000623466 3066 ntBASIC12.95□□□□□ -0.34
CLK1P49759 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC12.95□□□□□ -0.34
CLK1P49759 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
CLK1P49759 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC12.95□□□□□ -0.34
CLK1P49759 ARHGAP33-203ENST00000314737 3858 ntAPPRIS P3 TSL 2 BASIC12.95□□□□□ -0.34
CLK1P49759 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC12.95□□□□□ -0.34
CLK1P49759 RALGAPB-203ENST00000397042 8652 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLK1P49759 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC12.95□□□□□ -0.34
CLK1P49759 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC12.95□□□□□ -0.34
CLK1P49759 GNAS-214ENST00000371100 4029 ntTSL 5 BASIC12.95□□□□□ -0.34
CLK1P49759 RBM15-201ENST00000369784 4244 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CLK1P49759 ANO6-203ENST00000425752 3558 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLK1P49759 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLK1P49759 APOBR-201ENST00000431282 3765 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
CLK1P49759 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLK1P49759 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC12.95□□□□□ -0.34
CLK1P49759 DNAJB12-201ENST00000338820 4360 ntTSL 2 BASIC12.95□□□□□ -0.34
CLK1P49759 USP20-202ENST00000358355 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLK1P49759 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CLK1P49759 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC12.94□□□□□ -0.34
CLK1P49759 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLK1P49759 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC12.94□□□□□ -0.34
CLK1P49759 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLK1P49759 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CLK1P49759 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLK1P49759 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CLK1P49759 FAM131B-203ENST00000409408 5856 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLK1P49759 AKNA-201ENST00000223791 4414 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
CLK1P49759 CDC6-201ENST00000209728 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLK1P49759 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLK1P49759 MYO18B-202ENST00000407587 8090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLK1P49759 SHMT1P1-201ENST00000419974 1312 ntBASIC12.94□□□□□ -0.34
CLK1P49759 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CLK1P49759 ZKSCAN3-203ENST00000377255 4799 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLK1P49759 AL357673.2-201ENST00000623663 4969 ntTSL 5 BASIC12.94□□□□□ -0.34
CLK1P49759 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC12.94□□□□□ -0.34
CLK1P49759 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
CLK1P49759 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CLK1P49759 PNPO-217ENST00000642017 3465 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
CLK1P49759 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLK1P49759 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLK1P49759 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLK1P49759 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLK1P49759 RN7SKP214-201ENST00000364208 315 ntBASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms