Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
VTNP04004 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
VTNP04004 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VTNP04004 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.83□□□□□ -0.04
VTNP04004 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VTNP04004 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
VTNP04004 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
VTNP04004 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
VTNP04004 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
VTNP04004 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VTNP04004 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VTNP04004 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VTNP04004 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC14.83□□□□□ -0.04
VTNP04004 AL357079.1-203ENST00000412378 494 ntTSL 5 BASIC14.83□□□□□ -0.04
VTNP04004 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC14.83□□□□□ -0.04
VTNP04004 FAU-202ENST00000434372 533 ntTSL 2 BASIC14.83□□□□□ -0.04
VTNP04004 AC004895.1-202ENST00000435547 547 ntTSL 5 BASIC14.83□□□□□ -0.04
VTNP04004 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC14.83□□□□□ -0.04
VTNP04004 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC14.83□□□□□ -0.04
VTNP04004 MTHFD2P7-201ENST00000483867 983 ntBASIC14.83□□□□□ -0.04
VTNP04004 AK2-208ENST00000487289 920 ntTSL 2 BASIC14.83□□□□□ -0.04
VTNP04004 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VTNP04004 PHBP18-201ENST00000546648 813 ntBASIC14.83□□□□□ -0.04
VTNP04004 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC14.83□□□□□ -0.04
VTNP04004 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC14.83□□□□□ -0.04
VTNP04004 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC14.83□□□□□ -0.04
VTNP04004 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC14.83□□□□□ -0.04
VTNP04004 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC14.83□□□□□ -0.04
VTNP04004 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.83□□□□□ -0.04
VTNP04004 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VTNP04004 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VTNP04004 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
VTNP04004 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VTNP04004 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
VTNP04004 PTCD2-207ENST00000503868 1653 ntTSL 2 BASIC14.83□□□□□ -0.04
VTNP04004 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VTNP04004 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
VTNP04004 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VTNP04004 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VTNP04004 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VTNP04004 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VTNP04004 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC14.82□□□□□ -0.04
VTNP04004 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
VTNP04004 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
VTNP04004 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
VTNP04004 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
VTNP04004 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VTNP04004 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VTNP04004 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.82□□□□□ -0.04
VTNP04004 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
VTNP04004 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VTNP04004 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VTNP04004 TBC1D3P1-201ENST00000590047 1693 ntBASIC14.82□□□□□ -0.04
VTNP04004 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
VTNP04004 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
VTNP04004 PAEP-201ENST00000277508 821 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VTNP04004 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VTNP04004 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VTNP04004 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC14.82□□□□□ -0.04
VTNP04004 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VTNP04004 RPL18AP16-201ENST00000424057 531 ntBASIC14.82□□□□□ -0.04
VTNP04004 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
VTNP04004 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC14.82□□□□□ -0.04
VTNP04004 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
VTNP04004 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VTNP04004 TMEM106A-201ENST00000536052 1181 ntTSL 2 BASIC14.82□□□□□ -0.04
VTNP04004 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC14.82□□□□□ -0.04
VTNP04004 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VTNP04004 AC010202.1-201ENST00000551181 405 ntBASIC14.82□□□□□ -0.04
VTNP04004 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC14.82□□□□□ -0.04
VTNP04004 EIF5AP2-201ENST00000585668 1047 ntBASIC14.82□□□□□ -0.04
VTNP04004 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC14.82□□□□□ -0.04
VTNP04004 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC14.82□□□□□ -0.04
VTNP04004 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC14.82□□□□□ -0.04
VTNP04004 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC14.82□□□□□ -0.04
VTNP04004 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
VTNP04004 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VTNP04004 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC14.82□□□□□ -0.04
VTNP04004 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VTNP04004 TRIB1-203ENST00000520847 1332 ntTSL 2 BASIC14.82□□□□□ -0.04
VTNP04004 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VTNP04004 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VTNP04004 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VTNP04004 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VTNP04004 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VTNP04004 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
VTNP04004 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VTNP04004 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.82□□□□□ -0.04
VTNP04004 LTA-213ENST00000418386 1422 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VTNP04004 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
VTNP04004 CDCA7L-201ENST00000356195 2915 ntTSL 2 BASIC14.82□□□□□ -0.04
VTNP04004 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VTNP04004 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC14.82□□□□□ -0.04
VTNP04004 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VTNP04004 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC14.81□□□□□ -0.04
VTNP04004 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VTNP04004 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VTNP04004 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VTNP04004 AL359845.1-201ENST00000458202 1648 ntBASIC14.81□□□□□ -0.04
VTNP04004 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms