Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
KDELR3O43731 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC13.76□□□□□ -0.21
KDELR3O43731 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
KDELR3O43731 C2orf69P1-201ENST00000563532 1093 ntBASIC13.76□□□□□ -0.21
KDELR3O43731 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
KDELR3O43731 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
KDELR3O43731 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
KDELR3O43731 MIR6746-201ENST00000620971 63 ntBASIC13.76□□□□□ -0.21
KDELR3O43731 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
KDELR3O43731 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC13.76□□□□□ -0.21
KDELR3O43731 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC13.76□□□□□ -0.21
KDELR3O43731 AC026336.4-201ENST00000624565 1050 ntBASIC13.76□□□□□ -0.21
KDELR3O43731 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC13.76□□□□□ -0.21
KDELR3O43731 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.76□□□□□ -0.21
KDELR3O43731 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13.76□□□□□ -0.21
KDELR3O43731 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
KDELR3O43731 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
KDELR3O43731 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
KDELR3O43731 ZNF595-203ENST00000608255 1999 ntTSL 2 BASIC13.76□□□□□ -0.21
KDELR3O43731 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
KDELR3O43731 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
KDELR3O43731 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
KDELR3O43731 EHMT2-202ENST00000375530 3856 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
KDELR3O43731 C12orf66-201ENST00000311915 2698 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
KDELR3O43731 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.76□□□□□ -0.21
KDELR3O43731 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
KDELR3O43731 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
KDELR3O43731 TBC1D3P1-201ENST00000590047 1693 ntBASIC13.75□□□□□ -0.21
KDELR3O43731 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
KDELR3O43731 MIR497HG-202ENST00000572453 3838 ntBASIC13.75□□□□□ -0.21
KDELR3O43731 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
KDELR3O43731 CDC42-202ENST00000344548 2256 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
KDELR3O43731 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
KDELR3O43731 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.75□□□□□ -0.21
KDELR3O43731 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC13.75□□□□□ -0.21
KDELR3O43731 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
KDELR3O43731 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
KDELR3O43731 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
KDELR3O43731 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
KDELR3O43731 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC13.75□□□□□ -0.21
KDELR3O43731 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
KDELR3O43731 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
KDELR3O43731 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
KDELR3O43731 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
KDELR3O43731 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
KDELR3O43731 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
KDELR3O43731 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
KDELR3O43731 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
KDELR3O43731 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC13.75□□□□□ -0.21
KDELR3O43731 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
KDELR3O43731 RNA5SP491-201ENST00000362936 118 ntBASIC13.75□□□□□ -0.21
KDELR3O43731 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC13.75□□□□□ -0.21
KDELR3O43731 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
KDELR3O43731 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC13.75□□□□□ -0.21
KDELR3O43731 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
KDELR3O43731 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
KDELR3O43731 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC13.75□□□□□ -0.21
KDELR3O43731 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC13.75□□□□□ -0.21
KDELR3O43731 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC13.75□□□□□ -0.21
KDELR3O43731 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC13.75□□□□□ -0.21
KDELR3O43731 FAM90A28P-201ENST00000596881 489 ntTSL 5 BASIC13.75□□□□□ -0.21
KDELR3O43731 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
KDELR3O43731 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC13.75□□□□□ -0.21
KDELR3O43731 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
KDELR3O43731 NDUFAF6-201ENST00000396111 1869 ntTSL 5 BASIC13.75□□□□□ -0.21
KDELR3O43731 IP6K2-201ENST00000328631 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
KDELR3O43731 DDX19B-208ENST00000563392 1760 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
KDELR3O43731 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
KDELR3O43731 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
KDELR3O43731 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
KDELR3O43731 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
KDELR3O43731 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
KDELR3O43731 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC13.75□□□□□ -0.21
KDELR3O43731 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
KDELR3O43731 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
KDELR3O43731 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
KDELR3O43731 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KDELR3O43731 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KDELR3O43731 DNAJC30-201ENST00000395176 2485 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
KDELR3O43731 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KDELR3O43731 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
KDELR3O43731 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
KDELR3O43731 CDCA7L-201ENST00000356195 2915 ntTSL 2 BASIC13.74□□□□□ -0.21
KDELR3O43731 HPGD-204ENST00000504433 1910 ntTSL 2 BASIC13.74□□□□□ -0.21
KDELR3O43731 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
KDELR3O43731 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KDELR3O43731 AC012358.2-201ENST00000430010 1434 ntBASIC13.74□□□□□ -0.21
KDELR3O43731 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC13.74□□□□□ -0.21
KDELR3O43731 Z97653.2-201ENST00000623057 1418 ntBASIC13.74□□□□□ -0.21
KDELR3O43731 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
KDELR3O43731 CHMP4C-201ENST00000297265 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KDELR3O43731 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
KDELR3O43731 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC13.74□□□□□ -0.21
KDELR3O43731 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KDELR3O43731 AC018904.2-201ENST00000561202 1757 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
KDELR3O43731 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KDELR3O43731 TRIB1-203ENST00000520847 1332 ntTSL 2 BASIC13.74□□□□□ -0.21
KDELR3O43731 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.74□□□□□ -0.21
KDELR3O43731 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KDELR3O43731 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms