Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLDN20P56880 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
CLDN20P56880 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC12.59□□□□□ -0.39
CLDN20P56880 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC12.59□□□□□ -0.39
CLDN20P56880 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLDN20P56880 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLDN20P56880 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC12.59□□□□□ -0.39
CLDN20P56880 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
CLDN20P56880 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC12.58□□□□□ -0.39
CLDN20P56880 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC12.58□□□□□ -0.39
CLDN20P56880 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CLDN20P56880 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC12.58□□□□□ -0.4
CLDN20P56880 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CLDN20P56880 FTX-216ENST00000638985 1367 ntTSL 5 BASIC12.58□□□□□ -0.4
CLDN20P56880 PHB-210ENST00000511832 1509 ntTSL 2 BASIC12.58□□□□□ -0.4
CLDN20P56880 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.58□□□□□ -0.4
CLDN20P56880 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CLDN20P56880 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CLDN20P56880 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
CLDN20P56880 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CLDN20P56880 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
CLDN20P56880 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CLDN20P56880 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC12.58□□□□□ -0.4
CLDN20P56880 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CLDN20P56880 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CLDN20P56880 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CLDN20P56880 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC12.58□□□□□ -0.4
CLDN20P56880 AK2P2-201ENST00000439142 405 ntBASIC12.58□□□□□ -0.4
CLDN20P56880 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CLDN20P56880 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC12.58□□□□□ -0.4
CLDN20P56880 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC12.58□□□□□ -0.4
CLDN20P56880 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC12.58□□□□□ -0.4
CLDN20P56880 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC12.58□□□□□ -0.4
CLDN20P56880 RN7SL181P-201ENST00000462921 277 ntBASIC12.58□□□□□ -0.4
CLDN20P56880 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
CLDN20P56880 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC12.58□□□□□ -0.4
CLDN20P56880 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CLDN20P56880 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC12.58□□□□□ -0.4
CLDN20P56880 AL031713.1-201ENST00000564813 661 ntBASIC12.58□□□□□ -0.4
CLDN20P56880 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC12.58□□□□□ -0.4
CLDN20P56880 MIR3147-201ENST00000577811 66 ntBASIC12.58□□□□□ -0.4
CLDN20P56880 MIR4706-201ENST00000582134 82 ntBASIC12.58□□□□□ -0.4
CLDN20P56880 MIR4265-201ENST00000582152 99 ntBASIC12.58□□□□□ -0.4
CLDN20P56880 RPL17P45-201ENST00000586289 509 ntBASIC12.58□□□□□ -0.4
CLDN20P56880 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC12.58□□□□□ -0.4
CLDN20P56880 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC12.58□□□□□ -0.4
CLDN20P56880 MIR6842-201ENST00000612539 65 ntBASIC12.58□□□□□ -0.4
CLDN20P56880 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.58□□□□□ -0.4
CLDN20P56880 HPX-213ENST00000615166 826 ntTSL 5 BASIC12.58□□□□□ -0.4
CLDN20P56880 AC025262.2-201ENST00000623975 1056 ntBASIC12.58□□□□□ -0.4
CLDN20P56880 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CLDN20P56880 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CLDN20P56880 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CLDN20P56880 FAM90A11P-201ENST00000518378 2218 ntBASIC12.58□□□□□ -0.4
CLDN20P56880 PI4KAP2-201ENST00000360806 2080 ntBASIC12.58□□□□□ -0.4
CLDN20P56880 GHET1-201ENST00000627071 1906 ntBASIC12.58□□□□□ -0.4
CLDN20P56880 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CLDN20P56880 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC12.58□□□□□ -0.4
CLDN20P56880 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CLDN20P56880 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC12.58□□□□□ -0.4
CLDN20P56880 TUBB4AP1-201ENST00000450755 1325 ntBASIC12.58□□□□□ -0.4
CLDN20P56880 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CLDN20P56880 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CLDN20P56880 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CLDN20P56880 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CLDN20P56880 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CLDN20P56880 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CLDN20P56880 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CLDN20P56880 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CLDN20P56880 STX3-207ENST00000633708 3111 ntTSL 5 BASIC12.57□□□□□ -0.4
CLDN20P56880 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CLDN20P56880 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC12.57□□□□□ -0.4
CLDN20P56880 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CLDN20P56880 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CLDN20P56880 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
CLDN20P56880 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CLDN20P56880 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CLDN20P56880 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CLDN20P56880 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CLDN20P56880 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CLDN20P56880 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
CLDN20P56880 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC12.57□□□□□ -0.4
CLDN20P56880 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CLDN20P56880 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CLDN20P56880 AP003969.2-201ENST00000623739 2275 ntBASIC12.57□□□□□ -0.4
CLDN20P56880 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC12.57□□□□□ -0.4
CLDN20P56880 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC12.57□□□□□ -0.4
CLDN20P56880 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
CLDN20P56880 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC12.57□□□□□ -0.4
CLDN20P56880 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CLDN20P56880 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.57□□□□□ -0.4
CLDN20P56880 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CLDN20P56880 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CLDN20P56880 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC12.57□□□□□ -0.4
CLDN20P56880 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CLDN20P56880 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CLDN20P56880 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC12.57□□□□□ -0.4
CLDN20P56880 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC12.57□□□□□ -0.4
CLDN20P56880 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC12.57□□□□□ -0.4
CLDN20P56880 RN7SL564P-201ENST00000496309 250 ntBASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms