Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NPIPB4C9JG80 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC12.04□□□□□ -0.48
NPIPB4C9JG80 AL031713.1-201ENST00000564813 661 ntBASIC12.04□□□□□ -0.48
NPIPB4C9JG80 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC12.04□□□□□ -0.48
NPIPB4C9JG80 AC007952.4-201ENST00000573866 637 ntBASIC12.04□□□□□ -0.48
NPIPB4C9JG80 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NPIPB4C9JG80 AC103691.2-201ENST00000618824 433 ntBASIC12.04□□□□□ -0.48
NPIPB4C9JG80 ALDOA-229ENST00000636698 420 ntTSL 3 BASIC12.04□□□□□ -0.48
NPIPB4C9JG80 C1R-209ENST00000542285 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NPIPB4C9JG80 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NPIPB4C9JG80 PCDHB18P-202ENST00000526308 3197 ntBASIC12.04□□□□□ -0.48
NPIPB4C9JG80 CCDC175-201ENST00000281581 2487 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
NPIPB4C9JG80 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
NPIPB4C9JG80 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC12.04□□□□□ -0.48
NPIPB4C9JG80 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
NPIPB4C9JG80 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NPIPB4C9JG80 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
NPIPB4C9JG80 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NPIPB4C9JG80 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NPIPB4C9JG80 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC12.04□□□□□ -0.48
NPIPB4C9JG80 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
NPIPB4C9JG80 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
NPIPB4C9JG80 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
NPIPB4C9JG80 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NPIPB4C9JG80 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
NPIPB4C9JG80 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NPIPB4C9JG80 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
NPIPB4C9JG80 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC12.03□□□□□ -0.48
NPIPB4C9JG80 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC12.03□□□□□ -0.48
NPIPB4C9JG80 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC12.03□□□□□ -0.48
NPIPB4C9JG80 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPB4C9JG80 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
NPIPB4C9JG80 FTO-214ENST00000636218 2227 ntTSL 5 BASIC12.03□□□□□ -0.48
NPIPB4C9JG80 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPB4C9JG80 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPB4C9JG80 CSTF2-201ENST00000372972 1958 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPB4C9JG80 AP000229.1-201ENST00000608591 1979 ntTSL 4 BASIC12.03□□□□□ -0.48
NPIPB4C9JG80 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
NPIPB4C9JG80 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
NPIPB4C9JG80 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
NPIPB4C9JG80 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPB4C9JG80 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
NPIPB4C9JG80 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPB4C9JG80 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
NPIPB4C9JG80 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPB4C9JG80 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC12.03□□□□□ -0.48
NPIPB4C9JG80 CCDC149-208ENST00000635206 2362 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
NPIPB4C9JG80 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPB4C9JG80 ELMOD3-201ENST00000315658 2685 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPB4C9JG80 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
NPIPB4C9JG80 SNORD23-201ENST00000408876 110 ntBASIC12.03□□□□□ -0.48
NPIPB4C9JG80 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC12.03□□□□□ -0.48
NPIPB4C9JG80 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC12.03□□□□□ -0.48
NPIPB4C9JG80 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPB4C9JG80 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC12.03□□□□□ -0.48
NPIPB4C9JG80 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPB4C9JG80 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
NPIPB4C9JG80 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPB4C9JG80 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPB4C9JG80 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPB4C9JG80 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC12.03□□□□□ -0.48
NPIPB4C9JG80 IMP3P2-201ENST00000489760 475 ntBASIC12.03□□□□□ -0.48
NPIPB4C9JG80 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC12.03□□□□□ -0.48
NPIPB4C9JG80 AP000911.2-201ENST00000534330 502 ntBASIC12.03□□□□□ -0.48
NPIPB4C9JG80 IQSEC3P1-201ENST00000538799 536 ntBASIC12.03□□□□□ -0.48
NPIPB4C9JG80 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC12.03□□□□□ -0.48
NPIPB4C9JG80 RN7SL556P-201ENST00000582856 298 ntBASIC12.03□□□□□ -0.48
NPIPB4C9JG80 AL133499.1-201ENST00000596207 608 ntBASIC12.03□□□□□ -0.48
NPIPB4C9JG80 FAM90A28P-201ENST00000596881 489 ntTSL 5 BASIC12.03□□□□□ -0.48
NPIPB4C9JG80 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC12.03□□□□□ -0.48
NPIPB4C9JG80 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPB4C9JG80 ATP6V0D1-218ENST00000602876 1554 ntTSL 5 BASIC12.03□□□□□ -0.48
NPIPB4C9JG80 RHOH-222ENST00000617441 1872 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
NPIPB4C9JG80 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPB4C9JG80 SRSF5-201ENST00000394366 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPB4C9JG80 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPB4C9JG80 CYP24A1-203ENST00000395955 2227 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPB4C9JG80 L3MBTL1-202ENST00000373134 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPB4C9JG80 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPB4C9JG80 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPB4C9JG80 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPB4C9JG80 TBC1D3P1-201ENST00000590047 1693 ntBASIC12.03□□□□□ -0.48
NPIPB4C9JG80 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPB4C9JG80 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPB4C9JG80 PCDHB19P-202ENST00000625133 2914 ntBASIC12.03□□□□□ -0.48
NPIPB4C9JG80 PPARG-206ENST00000397012 2006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPB4C9JG80 MRPL44-201ENST00000258383 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPB4C9JG80 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPB4C9JG80 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC12.03□□□□□ -0.48
NPIPB4C9JG80 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NPIPB4C9JG80 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
NPIPB4C9JG80 LINC00567-201ENST00000569854 3409 ntBASIC12.02□□□□□ -0.48
NPIPB4C9JG80 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC12.02□□□□□ -0.48
NPIPB4C9JG80 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC12.02□□□□□ -0.48
NPIPB4C9JG80 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC12.02□□□□□ -0.48
NPIPB4C9JG80 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC12.02□□□□□ -0.48
NPIPB4C9JG80 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
NPIPB4C9JG80 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC12.02□□□□□ -0.48
NPIPB4C9JG80 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
NPIPB4C9JG80 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms