Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 SMU1-201ENST00000397149 7122 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 ARMCX6-201ENST00000361910 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 ALDH1L1-202ENST00000393431 2797 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 CLCN4-203ENST00000421085 6534 ntTSL 5 BASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 AC245140.2-201ENST00000624054 1939 ntBASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 UBE2L3-204ENST00000545681 2932 ntTSL 2 BASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 GOLGA8O-201ENST00000509311 1997 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 FLJ30679-201ENST00000624773 1980 ntBASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 MAP2-201ENST00000199940 2241 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 CHL1-201ENST00000256509 8023 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 TEX35-203ENST00000367641 2377 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 NEDD4L-208ENST00000456173 4978 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 MID1IP1-204ENST00000614558 3781 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 ZBTB12BP-201ENST00000314232 1122 ntBASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 KRT18P36-201ENST00000411618 1276 ntBASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 USB1-202ENST00000423271 1217 ntTSL 2 BASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 FAM197Y7-201ENST00000432892 766 ntBASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 OR2R1P-201ENST00000441404 914 ntBASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 AP001889.1-201ENST00000525414 633 ntBASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 GPALPP1-207ENST00000611650 899 ntBASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 AC006453.4-201ENST00000636949 1252 ntBASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 Z98259.2-201ENST00000641583 609 ntBASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 EGLN3-205ENST00000547327 2849 ntBASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 ABCC4-207ENST00000629385 2903 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 SEC13-203ENST00000383801 1479 ntTSL 2 BASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 RNGTT-202ENST00000369485 4553 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 GDPD5-202ENST00000443276 3106 ntTSL 5 BASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 PCDHGA12-201ENST00000252085 4747 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 RGL1-202ENST00000360851 4724 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 AL449403.1-201ENST00000432783 1577 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 AP002353.1-201ENST00000528257 1599 ntBASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 ERP44-201ENST00000262455 4854 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 ATXN10-201ENST00000252934 3329 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 PNPLA8-208ENST00000453144 3366 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 ZCRB1-201ENST00000266529 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 ROBO1-212ENST00000618833 7492 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 RAB3IP-212ENST00000550536 9646 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 TBC1D22A-203ENST00000380995 3934 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 GRIN2A-206ENST00000562109 4338 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 AC007336.3-201ENST00000623886 2160 ntBASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 PIGC-202ENST00000367728 2630 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 PAX7-203ENST00000420770 5538 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 COL4A6-209ENST00000545689 6380 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 ABCB9-201ENST00000280560 3517 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 NPR2-201ENST00000342694 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 KCTD10-201ENST00000228495 4163 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 FBXW8-202ENST00000455858 4648 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 MYRF-201ENST00000265460 5745 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 TBX3-201ENST00000257566 4208 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 NUF2-201ENST00000271452 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 LIN28A-202ENST00000326279 4008 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 DAXX-202ENST00000374542 2613 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 PCSK2-202ENST00000377899 4674 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 PARP3-202ENST00000417220 2472 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 C2orf27AP3-201ENST00000434123 579 ntBASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 METTL21AP1-201ENST00000438852 635 ntBASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 TSPY16P-201ENST00000449843 468 ntBASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RCL1Q9Y2P8 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC11.22□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms