Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLDN20P56880 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC12.6□□□□□ -0.39
CLDN20P56880 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLDN20P56880 HLA-DMA-203ENST00000395305 777 ntBASIC12.6□□□□□ -0.39
CLDN20P56880 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLDN20P56880 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC12.6□□□□□ -0.39
CLDN20P56880 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CLDN20P56880 AC078991.1-201ENST00000437297 610 ntBASIC12.6□□□□□ -0.39
CLDN20P56880 AC018638.5-201ENST00000450885 754 ntBASIC12.6□□□□□ -0.39
CLDN20P56880 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC12.6□□□□□ -0.39
CLDN20P56880 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC12.6□□□□□ -0.39
CLDN20P56880 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
CLDN20P56880 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC12.6□□□□□ -0.39
CLDN20P56880 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC12.6□□□□□ -0.39
CLDN20P56880 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC12.6□□□□□ -0.39
CLDN20P56880 HERC2P11-201ENST00000562845 725 ntBASIC12.6□□□□□ -0.39
CLDN20P56880 COG4-212ENST00000564653 590 ntTSL 5 BASIC12.6□□□□□ -0.39
CLDN20P56880 AC100756.2-201ENST00000569537 736 ntBASIC12.6□□□□□ -0.39
CLDN20P56880 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC12.6□□□□□ -0.39
CLDN20P56880 KRT18P8-201ENST00000581937 1246 ntBASIC12.6□□□□□ -0.39
CLDN20P56880 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC12.6□□□□□ -0.39
CLDN20P56880 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC12.6□□□□□ -0.39
CLDN20P56880 AC073352.2-201ENST00000609385 439 ntBASIC12.6□□□□□ -0.39
CLDN20P56880 AC087392.5-201ENST00000612517 489 ntBASIC12.6□□□□□ -0.39
CLDN20P56880 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC12.6□□□□□ -0.39
CLDN20P56880 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC12.6□□□□□ -0.39
CLDN20P56880 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLDN20P56880 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLDN20P56880 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CLDN20P56880 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CLDN20P56880 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLDN20P56880 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLDN20P56880 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CLDN20P56880 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
CLDN20P56880 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLDN20P56880 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CLDN20P56880 AC138761.6-201ENST00000583997 1423 ntBASIC12.6□□□□□ -0.39
CLDN20P56880 AC012531.1-201ENST00000562848 2680 ntBASIC12.6□□□□□ -0.39
CLDN20P56880 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC12.6□□□□□ -0.39
CLDN20P56880 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLDN20P56880 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLDN20P56880 AC026271.4-201ENST00000578214 1833 ntBASIC12.6□□□□□ -0.39
CLDN20P56880 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CLDN20P56880 AC008620.2-201ENST00000510294 1569 ntBASIC12.6□□□□□ -0.39
CLDN20P56880 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CLDN20P56880 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CLDN20P56880 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLDN20P56880 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLDN20P56880 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLDN20P56880 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC12.6□□□□□ -0.39
CLDN20P56880 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLDN20P56880 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.6□□□□□ -0.39
CLDN20P56880 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC12.59□□□□□ -0.39
CLDN20P56880 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLDN20P56880 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLDN20P56880 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLDN20P56880 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLDN20P56880 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC12.59□□□□□ -0.39
CLDN20P56880 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC12.59□□□□□ -0.39
CLDN20P56880 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC12.59□□□□□ -0.39
CLDN20P56880 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLDN20P56880 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLDN20P56880 AL359845.1-201ENST00000458202 1648 ntBASIC12.59□□□□□ -0.39
CLDN20P56880 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC12.59□□□□□ -0.39
CLDN20P56880 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLDN20P56880 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC12.59□□□□□ -0.39
CLDN20P56880 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLDN20P56880 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
CLDN20P56880 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLDN20P56880 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CLDN20P56880 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLDN20P56880 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLDN20P56880 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLDN20P56880 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CLDN20P56880 GUSBP10-201ENST00000417412 665 ntBASIC12.59□□□□□ -0.39
CLDN20P56880 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC12.59□□□□□ -0.39
CLDN20P56880 HPGD-203ENST00000422112 805 ntTSL 2 BASIC12.59□□□□□ -0.39
CLDN20P56880 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC12.59□□□□□ -0.39
CLDN20P56880 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC12.59□□□□□ -0.39
CLDN20P56880 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC12.59□□□□□ -0.39
CLDN20P56880 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC12.59□□□□□ -0.39
CLDN20P56880 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC12.59□□□□□ -0.39
CLDN20P56880 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC12.59□□□□□ -0.39
CLDN20P56880 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC12.59□□□□□ -0.39
CLDN20P56880 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
CLDN20P56880 AC130709.1-201ENST00000484779 1212 ntBASIC12.59□□□□□ -0.39
CLDN20P56880 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC12.59□□□□□ -0.39
CLDN20P56880 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLDN20P56880 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
CLDN20P56880 OR5BD1P-201ENST00000532527 817 ntBASIC12.59□□□□□ -0.39
CLDN20P56880 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC12.59□□□□□ -0.39
CLDN20P56880 MIR2392-201ENST00000584881 84 ntBASIC12.59□□□□□ -0.39
CLDN20P56880 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
CLDN20P56880 AC092171.5-201ENST00000608012 942 ntBASIC12.59□□□□□ -0.39
CLDN20P56880 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
CLDN20P56880 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CLDN20P56880 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLDN20P56880 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLDN20P56880 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLDN20P56880 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms