Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 URB1-AS1-201ENST00000534991 831 ntBASIC13.09□□□□□ -0.31
CLDN6P56747 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC13.09□□□□□ -0.31
CLDN6P56747 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN6P56747 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC13.09□□□□□ -0.31
CLDN6P56747 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC13.09□□□□□ -0.31
CLDN6P56747 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC13.09□□□□□ -0.31
CLDN6P56747 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC13.09□□□□□ -0.31
CLDN6P56747 ERAS-202ENST00000636362 826 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
CLDN6P56747 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN6P56747 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC13.09□□□□□ -0.31
CLDN6P56747 USP39-207ENST00000450066 2086 ntTSL 2 BASIC13.09□□□□□ -0.31
CLDN6P56747 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
CLDN6P56747 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN6P56747 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN6P56747 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN6P56747 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
CLDN6P56747 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN6P56747 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN6P56747 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN6P56747 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC13.09□□□□□ -0.31
CLDN6P56747 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.09□□□□□ -0.31
CLDN6P56747 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
CLDN6P56747 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.08□□□□□ -0.31
CLDN6P56747 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.08□□□□□ -0.32
CLDN6P56747 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN6P56747 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN6P56747 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN6P56747 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN6P56747 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN6P56747 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN6P56747 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN6P56747 NRADDP-202ENST00000641269 1585 ntBASIC13.08□□□□□ -0.32
CLDN6P56747 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC13.08□□□□□ -0.32
CLDN6P56747 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN6P56747 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
CLDN6P56747 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
CLDN6P56747 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
CLDN6P56747 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN6P56747 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN6P56747 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN6P56747 CSRP2-201ENST00000311083 943 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN6P56747 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN6P56747 INMT-202ENST00000409539 803 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN6P56747 FAM197Y6-201ENST00000420524 766 ntBASIC13.08□□□□□ -0.32
CLDN6P56747 AC010086.2-201ENST00000428616 226 ntBASIC13.08□□□□□ -0.32
CLDN6P56747 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC13.08□□□□□ -0.32
CLDN6P56747 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC13.08□□□□□ -0.32
CLDN6P56747 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC13.08□□□□□ -0.32
CLDN6P56747 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN6P56747 AC023051.2-201ENST00000541141 460 ntBASIC13.08□□□□□ -0.32
CLDN6P56747 CSRP2-203ENST00000547435 632 ntTSL 2 BASIC13.08□□□□□ -0.32
CLDN6P56747 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC13.08□□□□□ -0.32
CLDN6P56747 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC13.08□□□□□ -0.32
CLDN6P56747 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC13.08□□□□□ -0.32
CLDN6P56747 RN7SL478P-201ENST00000584358 298 ntBASIC13.08□□□□□ -0.32
CLDN6P56747 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC13.08□□□□□ -0.32
CLDN6P56747 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC13.08□□□□□ -0.32
CLDN6P56747 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC13.08□□□□□ -0.32
CLDN6P56747 AC138627.1-201ENST00000641127 1257 ntBASIC13.08□□□□□ -0.32
CLDN6P56747 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN6P56747 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
CLDN6P56747 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN6P56747 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN6P56747 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
CLDN6P56747 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.08□□□□□ -0.32
CLDN6P56747 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.08□□□□□ -0.32
CLDN6P56747 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN6P56747 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
CLDN6P56747 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
CLDN6P56747 TFG-208ENST00000490574 1696 ntAPPRIS P3 TSL 3 BASIC13.08□□□□□ -0.32
CLDN6P56747 TUBB8P4-201ENST00000511806 1324 ntBASIC13.08□□□□□ -0.32
CLDN6P56747 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN6P56747 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CLDN6P56747 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN6P56747 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN6P56747 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN6P56747 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN6P56747 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN6P56747 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN6P56747 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN6P56747 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN6P56747 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
CLDN6P56747 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN6P56747 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN6P56747 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN6P56747 AC245140.2-201ENST00000624054 1939 ntBASIC13.07□□□□□ -0.32
CLDN6P56747 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN6P56747 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN6P56747 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC13.07□□□□□ -0.32
CLDN6P56747 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CLDN6P56747 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.07□□□□□ -0.32
CLDN6P56747 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN6P56747 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN6P56747 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN6P56747 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN6P56747 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN6P56747 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CLDN6P56747 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CLDN6P56747 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.07□□□□□ -0.32
CLDN6P56747 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms