Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AP1S2P56377 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.34□□□□□ -0.27
AP1S2P56377 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC13.34□□□□□ -0.27
AP1S2P56377 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC13.34□□□□□ -0.27
AP1S2P56377 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AP1S2P56377 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC13.34□□□□□ -0.27
AP1S2P56377 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
AP1S2P56377 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
AP1S2P56377 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC13.34□□□□□ -0.27
AP1S2P56377 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AP1S2P56377 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AP1S2P56377 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC13.34□□□□□ -0.27
AP1S2P56377 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC13.34□□□□□ -0.27
AP1S2P56377 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
AP1S2P56377 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC13.34□□□□□ -0.27
AP1S2P56377 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
AP1S2P56377 AC117503.4-201ENST00000623229 1418 ntBASIC13.34□□□□□ -0.27
AP1S2P56377 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC13.34□□□□□ -0.27
AP1S2P56377 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
AP1S2P56377 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AP1S2P56377 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC13.34□□□□□ -0.27
AP1S2P56377 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AP1S2P56377 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
AP1S2P56377 CELP-201ENST00000411440 1249 ntTSL 5 BASIC13.34□□□□□ -0.27
AP1S2P56377 OR52M2P-201ENST00000414298 959 ntBASIC13.34□□□□□ -0.27
AP1S2P56377 NME6-203ENST00000415644 849 ntTSL 2 BASIC13.34□□□□□ -0.27
AP1S2P56377 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC13.34□□□□□ -0.27
AP1S2P56377 STK24P1-201ENST00000455035 1291 ntBASIC13.34□□□□□ -0.27
AP1S2P56377 RN7SL769P-201ENST00000469386 295 ntBASIC13.34□□□□□ -0.27
AP1S2P56377 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC13.34□□□□□ -0.27
AP1S2P56377 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC13.34□□□□□ -0.27
AP1S2P56377 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC13.34□□□□□ -0.27
AP1S2P56377 HINT1-205ENST00000508488 703 ntTSL 2 BASIC13.34□□□□□ -0.27
AP1S2P56377 RN7SKP155-201ENST00000516031 288 ntBASIC13.34□□□□□ -0.27
AP1S2P56377 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC13.34□□□□□ -0.27
AP1S2P56377 AC134698.3-201ENST00000523880 214 ntBASIC13.34□□□□□ -0.27
AP1S2P56377 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC13.34□□□□□ -0.27
AP1S2P56377 HERC2P11-201ENST00000562845 725 ntBASIC13.34□□□□□ -0.27
AP1S2P56377 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC13.34□□□□□ -0.27
AP1S2P56377 AC100756.2-201ENST00000569537 736 ntBASIC13.34□□□□□ -0.27
AP1S2P56377 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC13.34□□□□□ -0.27
AP1S2P56377 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
AP1S2P56377 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC13.34□□□□□ -0.27
AP1S2P56377 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC13.34□□□□□ -0.27
AP1S2P56377 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AP1S2P56377 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AP1S2P56377 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
AP1S2P56377 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC13.34□□□□□ -0.27
AP1S2P56377 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
AP1S2P56377 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.34□□□□□ -0.27
AP1S2P56377 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC13.34□□□□□ -0.27
AP1S2P56377 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
AP1S2P56377 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
AP1S2P56377 OR8J1-202ENST00000533152 1320 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
AP1S2P56377 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC13.34□□□□□ -0.27
AP1S2P56377 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AP1S2P56377 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
AP1S2P56377 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
AP1S2P56377 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC13.34□□□□□ -0.27
AP1S2P56377 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
AP1S2P56377 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
AP1S2P56377 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
AP1S2P56377 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
AP1S2P56377 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
AP1S2P56377 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC13.33□□□□□ -0.27
AP1S2P56377 OS9-218ENST00000551035 2246 ntTSL 2 BASIC13.33□□□□□ -0.27
AP1S2P56377 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.27
AP1S2P56377 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
AP1S2P56377 AC090502.4-201ENST00000551714 1386 ntBASIC13.33□□□□□ -0.27
AP1S2P56377 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
AP1S2P56377 PCDHA6-201ENST00000378126 3267 ntBASIC13.33□□□□□ -0.27
AP1S2P56377 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC13.33□□□□□ -0.27
AP1S2P56377 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
AP1S2P56377 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
AP1S2P56377 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
AP1S2P56377 AC115284.2-201ENST00000624646 2054 ntBASIC13.33□□□□□ -0.27
AP1S2P56377 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
AP1S2P56377 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
AP1S2P56377 POM121L14P-201ENST00000406100 1558 ntBASIC13.33□□□□□ -0.28
AP1S2P56377 SLC7A9-201ENST00000023064 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
AP1S2P56377 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
AP1S2P56377 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
AP1S2P56377 MEIS2-215ENST00000559561 1442 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
AP1S2P56377 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
AP1S2P56377 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
AP1S2P56377 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
AP1S2P56377 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC13.33□□□□□ -0.28
AP1S2P56377 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
AP1S2P56377 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
AP1S2P56377 SSR4-202ENST00000370085 526 ntTSL 2 BASIC13.33□□□□□ -0.28
AP1S2P56377 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
AP1S2P56377 AL512430.1-201ENST00000392575 860 ntBASIC13.33□□□□□ -0.28
AP1S2P56377 AC073210.1-201ENST00000414799 232 ntBASIC13.33□□□□□ -0.28
AP1S2P56377 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC13.33□□□□□ -0.28
AP1S2P56377 IMP3P2-201ENST00000489760 475 ntBASIC13.33□□□□□ -0.28
AP1S2P56377 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC13.33□□□□□ -0.28
AP1S2P56377 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
AP1S2P56377 AC019193.1-201ENST00000506678 823 ntBASIC13.33□□□□□ -0.28
AP1S2P56377 SAA2-206ENST00000530400 323 ntTSL 3 BASIC13.33□□□□□ -0.28
AP1S2P56377 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms