Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC14.7□□□□□ -0.06
SSR1P43307 ABCB9-201ENST00000280560 3517 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSR1P43307 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSR1P43307 AC067931.2-201ENST00000623655 2003 ntBASIC14.7□□□□□ -0.06
SSR1P43307 CAMSAP1-202ENST00000389532 7696 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
SSR1P43307 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSR1P43307 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SSR1P43307 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSR1P43307 AC108024.1-201ENST00000626286 1721 ntBASIC14.69□□□□□ -0.06
SSR1P43307 NRDC-214ENST00000544028 3819 ntTSL 5 BASIC14.69□□□□□ -0.06
SSR1P43307 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SSR1P43307 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSR1P43307 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SSR1P43307 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SSR1P43307 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSR1P43307 TP73-207ENST00000378290 1831 ntTSL 2 BASIC14.69□□□□□ -0.06
SSR1P43307 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC14.69□□□□□ -0.06
SSR1P43307 HEXA-201ENST00000268097 5252 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSR1P43307 KCNJ10-201ENST00000368089 5528 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSR1P43307 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSR1P43307 QSOX1-202ENST00000367602 9311 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSR1P43307 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSR1P43307 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC14.69□□□□□ -0.06
SSR1P43307 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.69□□□□□ -0.06
SSR1P43307 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSR1P43307 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
SSR1P43307 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SSR1P43307 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SSR1P43307 OARD1-204ENST00000464633 717 ntTSL 2 BASIC14.69□□□□□ -0.06
SSR1P43307 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC14.69□□□□□ -0.06
SSR1P43307 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC14.69□□□□□ -0.06
SSR1P43307 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.69□□□□□ -0.06
SSR1P43307 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC14.69□□□□□ -0.06
SSR1P43307 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC14.69□□□□□ -0.06
SSR1P43307 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSR1P43307 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSR1P43307 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC14.69□□□□□ -0.06
SSR1P43307 AL359881.2-201ENST00000602973 570 ntBASIC14.69□□□□□ -0.06
SSR1P43307 AL021707.6-201ENST00000609212 491 ntBASIC14.69□□□□□ -0.06
SSR1P43307 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC14.69□□□□□ -0.06
SSR1P43307 AL033527.4-201ENST00000641026 673 ntBASIC14.69□□□□□ -0.06
SSR1P43307 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSR1P43307 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSR1P43307 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSR1P43307 AC015909.3-201ENST00000572855 1794 ntBASIC14.69□□□□□ -0.06
SSR1P43307 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SSR1P43307 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC14.69□□□□□ -0.06
SSR1P43307 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSR1P43307 MAN2B2-201ENST00000285599 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSR1P43307 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SSR1P43307 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC14.69□□□□□ -0.06
SSR1P43307 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SSR1P43307 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC14.69□□□□□ -0.06
SSR1P43307 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SSR1P43307 SNIP1-201ENST00000296215 4605 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSR1P43307 XYLT2-201ENST00000017003 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSR1P43307 DPYSL5-201ENST00000288699 5209 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSR1P43307 MARVELD2-201ENST00000325631 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSR1P43307 CILP-201ENST00000261883 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSR1P43307 BSDC1-201ENST00000341071 4599 ntTSL 2 BASIC14.68□□□□□ -0.06
SSR1P43307 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SSR1P43307 PDE2A-201ENST00000334456 4315 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSR1P43307 PCNX4-202ENST00000391611 4073 ntTSL 2 BASIC14.68□□□□□ -0.06
SSR1P43307 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSR1P43307 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSR1P43307 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SSR1P43307 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSR1P43307 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC14.68□□□□□ -0.06
SSR1P43307 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SSR1P43307 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
SSR1P43307 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SSR1P43307 SLIT2-204ENST00000504154 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSR1P43307 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSR1P43307 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC14.68□□□□□ -0.06
SSR1P43307 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSR1P43307 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC14.68□□□□□ -0.06
SSR1P43307 RPS6KA2-211ENST00000510118 5992 ntTSL 2 BASIC14.68□□□□□ -0.06
SSR1P43307 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC14.68□□□□□ -0.06
SSR1P43307 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
SSR1P43307 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SSR1P43307 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSR1P43307 OGFR-202ENST00000370461 4506 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
SSR1P43307 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SSR1P43307 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SSR1P43307 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
SSR1P43307 CRCP-204ENST00000398684 492 ntTSL 2 BASIC14.68□□□□□ -0.06
SSR1P43307 SLC25A15P3-201ENST00000505530 290 ntBASIC14.68□□□□□ -0.06
SSR1P43307 AC090857.1-201ENST00000527400 390 ntBASIC14.68□□□□□ -0.06
SSR1P43307 PUDP-206ENST00000540122 825 ntTSL 2 BASIC14.68□□□□□ -0.06
SSR1P43307 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SSR1P43307 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC14.68□□□□□ -0.06
SSR1P43307 AC026740.1-201ENST00000607068 791 ntBASIC14.68□□□□□ -0.06
SSR1P43307 AC015967.2-201ENST00000624092 234 ntBASIC14.68□□□□□ -0.06
SSR1P43307 AC006435.4-201ENST00000625037 234 ntBASIC14.68□□□□□ -0.06
SSR1P43307 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
SSR1P43307 AL356737.1-201ENST00000634391 234 ntBASIC14.68□□□□□ -0.06
SSR1P43307 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.68□□□□□ -0.06
SSR1P43307 AL805961.1-203ENST00000641078 1258 ntBASIC14.68□□□□□ -0.06
SSR1P43307 AL139424.3-202ENST00000641619 917 ntBASIC14.68□□□□□ -0.06
SSR1P43307 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms