Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
COL15A1P39059 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL15A1P39059 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL15A1P39059 SRL-202ENST00000537996 1814 ntTSL 2 BASIC16.99■□□□□ 0.31
COL15A1P39059 AC002350.2-201ENST00000623894 1828 ntBASIC16.99■□□□□ 0.31
COL15A1P39059 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL15A1P39059 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
COL15A1P39059 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
COL15A1P39059 PI4KAP2-201ENST00000360806 2080 ntBASIC16.98■□□□□ 0.31
COL15A1P39059 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COL15A1P39059 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COL15A1P39059 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COL15A1P39059 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COL15A1P39059 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC16.98■□□□□ 0.31
COL15A1P39059 ARF4-201ENST00000303436 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COL15A1P39059 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
COL15A1P39059 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COL15A1P39059 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COL15A1P39059 PXK-210ENST00000479241 2817 ntTSL 2 BASIC16.98■□□□□ 0.31
COL15A1P39059 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COL15A1P39059 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COL15A1P39059 IQCF1-201ENST00000310914 695 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COL15A1P39059 FAM178B-201ENST00000393526 1004 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
COL15A1P39059 RPL18AP15-201ENST00000430258 517 ntBASIC16.98■□□□□ 0.31
COL15A1P39059 AC004895.1-202ENST00000435547 547 ntTSL 5 BASIC16.98■□□□□ 0.31
COL15A1P39059 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
COL15A1P39059 TULP3P1-202ENST00000453253 1291 ntBASIC16.98■□□□□ 0.31
COL15A1P39059 RN7SL173P-201ENST00000461853 292 ntBASIC16.98■□□□□ 0.31
COL15A1P39059 H1FOO-202ENST00000503977 881 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
COL15A1P39059 C3orf84-203ENST00000545770 706 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
COL15A1P39059 AC079336.3-201ENST00000577227 475 ntTSL 3 BASIC16.98■□□□□ 0.31
COL15A1P39059 EEF1DP7-201ENST00000580496 513 ntBASIC16.98■□□□□ 0.31
COL15A1P39059 PACRG-AS3-204ENST00000620150 567 ntTSL 4 BASIC16.98■□□□□ 0.31
COL15A1P39059 SPAG1-205ENST00000520508 1796 ntTSL 5 BASIC16.98■□□□□ 0.31
COL15A1P39059 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
COL15A1P39059 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
COL15A1P39059 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COL15A1P39059 SP140L-205ENST00000458341 1727 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
COL15A1P39059 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
COL15A1P39059 AP000787.1-205ENST00000536683 1485 ntTSL 5 BASIC16.98■□□□□ 0.31
COL15A1P39059 ZSCAN5DP-201ENST00000600684 1488 ntBASIC16.98■□□□□ 0.31
COL15A1P39059 HPGD-204ENST00000504433 1910 ntTSL 2 BASIC16.98■□□□□ 0.31
COL15A1P39059 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
COL15A1P39059 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC16.98■□□□□ 0.31
COL15A1P39059 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
COL15A1P39059 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL15A1P39059 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC16.97■□□□□ 0.31
COL15A1P39059 LINC00638-201ENST00000555578 2518 ntBASIC16.97■□□□□ 0.31
COL15A1P39059 RDX-218ENST00000544551 4117 ntTSL 2 BASIC16.97■□□□□ 0.31
COL15A1P39059 F2-205ENST00000530231 1849 ntTSL 5 BASIC16.97■□□□□ 0.31
COL15A1P39059 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL15A1P39059 ALG6-202ENST00000371108 3371 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL15A1P39059 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
COL15A1P39059 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
COL15A1P39059 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC16.97■□□□□ 0.31
COL15A1P39059 WFDC3-201ENST00000243938 1000 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL15A1P39059 KRTAP12-1-201ENST00000391617 588 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
COL15A1P39059 MARCKSL1P2-201ENST00000401037 976 ntBASIC16.97■□□□□ 0.31
COL15A1P39059 AC005014.1-201ENST00000432006 2976 ntBASIC16.97■□□□□ 0.31
COL15A1P39059 DMKN-211ENST00000436012 848 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
COL15A1P39059 RAI1-AS1-201ENST00000443696 724 ntTSL 5 BASIC16.97■□□□□ 0.31
COL15A1P39059 BICD1P1-201ENST00000457832 1222 ntBASIC16.97■□□□□ 0.31
COL15A1P39059 TSTD1-206ENST00000466967 477 ntTSL 2 BASIC16.97■□□□□ 0.31
COL15A1P39059 AC108724.1-201ENST00000481669 352 ntBASIC16.97■□□□□ 0.31
COL15A1P39059 AC092656.1-202ENST00000515843 998 ntTSL 4 BASIC16.97■□□□□ 0.31
COL15A1P39059 AP001107.9-202ENST00000531602 613 ntTSL 2 BASIC16.97■□□□□ 0.31
COL15A1P39059 DDX11L8-201ENST00000535849 366 ntBASIC16.97■□□□□ 0.31
COL15A1P39059 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL15A1P39059 CSRP2-207ENST00000552330 910 ntTSL 3 BASIC16.97■□□□□ 0.31
COL15A1P39059 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COL15A1P39059 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
COL15A1P39059 PCDHA3-202ENST00000532566 4594 ntBASIC16.97■□□□□ 0.31
COL15A1P39059 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
COL15A1P39059 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC16.97■□□□□ 0.31
COL15A1P39059 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC16.97■□□□□ 0.31
COL15A1P39059 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL15A1P39059 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL15A1P39059 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL15A1P39059 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COL15A1P39059 GPN1-211ENST00000610189 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL15A1P39059 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC16.96■□□□□ 0.31
COL15A1P39059 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL15A1P39059 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL15A1P39059 ZNF33A-205ENST00000469037 1530 ntTSL 5 BASIC16.96■□□□□ 0.31
COL15A1P39059 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL15A1P39059 PTCD2-207ENST00000503868 1653 ntTSL 2 BASIC16.96■□□□□ 0.31
COL15A1P39059 AC067930.6-201ENST00000623257 4947 ntBASIC16.96■□□□□ 0.31
COL15A1P39059 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL15A1P39059 KRTAP10-11-201ENST00000334670 1237 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
COL15A1P39059 OR7E12P-201ENST00000344740 973 ntBASIC16.96■□□□□ 0.31
COL15A1P39059 ASLP1-201ENST00000428790 637 ntBASIC16.96■□□□□ 0.31
COL15A1P39059 AC103563.2-201ENST00000442200 597 ntTSL 5 BASIC16.96■□□□□ 0.31
COL15A1P39059 FAM86JP-202ENST00000484500 988 ntBASIC16.96■□□□□ 0.31
COL15A1P39059 RN7SL646P-201ENST00000492969 297 ntBASIC16.96■□□□□ 0.31
COL15A1P39059 AC103724.2-201ENST00000520355 476 ntBASIC16.96■□□□□ 0.31
COL15A1P39059 CETN3-205ENST00000522842 664 ntTSL 2 BASIC16.96■□□□□ 0.31
COL15A1P39059 ABCD1P3-201ENST00000562927 605 ntBASIC16.96■□□□□ 0.31
COL15A1P39059 AC006262.2-202ENST00000600152 333 ntTSL 2 BASIC16.96■□□□□ 0.31
COL15A1P39059 AC011483.3-201ENST00000601506 826 ntTSL 3 BASIC16.96■□□□□ 0.31
COL15A1P39059 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms