Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
PDE6BP35913 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDE6BP35913 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDE6BP35913 MARK2P9-201ENST00000430958 1727 ntBASIC16.61■□□□□ 0.25
PDE6BP35913 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC16.61■□□□□ 0.25
PDE6BP35913 ASMT-203ENST00000381241 1388 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PDE6BP35913 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDE6BP35913 DDC-213ENST00000617822 1809 ntTSL 3 BASIC16.61■□□□□ 0.25
PDE6BP35913 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDE6BP35913 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PDE6BP35913 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDE6BP35913 AL157996.1-201ENST00000624684 2299 ntBASIC16.61■□□□□ 0.25
PDE6BP35913 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
PDE6BP35913 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.6■□□□□ 0.25
PDE6BP35913 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PDE6BP35913 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PDE6BP35913 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
PDE6BP35913 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
PDE6BP35913 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDE6BP35913 STK25-235ENST00000543554 2556 ntTSL 2 BASIC16.6■□□□□ 0.25
PDE6BP35913 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDE6BP35913 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PDE6BP35913 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDE6BP35913 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDE6BP35913 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDE6BP35913 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDE6BP35913 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PDE6BP35913 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
PDE6BP35913 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDE6BP35913 AL357033.2-201ENST00000430184 739 ntTSL 3 BASIC16.6■□□□□ 0.25
PDE6BP35913 RPE-208ENST00000436630 1128 ntTSL 2 BASIC16.6■□□□□ 0.25
PDE6BP35913 CHN2-214ENST00000439711 755 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PDE6BP35913 AP000959.1-201ENST00000441759 977 ntTSL 3 BASIC16.6■□□□□ 0.25
PDE6BP35913 HTATIP2-203ENST00000443524 967 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PDE6BP35913 AC092656.1-202ENST00000515843 998 ntTSL 4 BASIC16.6■□□□□ 0.25
PDE6BP35913 TMEM241-208ENST00000542162 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDE6BP35913 AL583722.3-201ENST00000553433 503 ntTSL 4 BASIC16.6■□□□□ 0.25
PDE6BP35913 TRPM1-210ENST00000559179 1002 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PDE6BP35913 AC027228.1-201ENST00000560094 325 ntTSL 3 BASIC16.6■□□□□ 0.25
PDE6BP35913 NPTN-205ENST00000563691 1214 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDE6BP35913 GRAPL-204ENST00000577213 866 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
PDE6BP35913 ANAPC11-214ENST00000578544 403 ntTSL 3 BASIC16.6■□□□□ 0.25
PDE6BP35913 MIR4526-201ENST00000583168 87 ntBASIC16.6■□□□□ 0.25
PDE6BP35913 AP001120.3-201ENST00000585729 489 ntBASIC16.6■□□□□ 0.25
PDE6BP35913 AC006262.2-202ENST00000600152 333 ntTSL 2 BASIC16.6■□□□□ 0.25
PDE6BP35913 MIR6893-201ENST00000613458 69 ntBASIC16.6■□□□□ 0.25
PDE6BP35913 Z82244.1-201ENST00000631502 840 ntBASIC16.6■□□□□ 0.25
PDE6BP35913 AC245369.8-201ENST00000636589 306 ntBASIC16.6■□□□□ 0.25
PDE6BP35913 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PDE6BP35913 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC16.6■□□□□ 0.25
PDE6BP35913 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDE6BP35913 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDE6BP35913 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PDE6BP35913 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDE6BP35913 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PDE6BP35913 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDE6BP35913 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDE6BP35913 MCF2L-209ENST00000397036 1544 ntTSL 2 BASIC16.6■□□□□ 0.25
PDE6BP35913 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDE6BP35913 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PDE6BP35913 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PDE6BP35913 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PDE6BP35913 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PDE6BP35913 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC16.59■□□□□ 0.25
PDE6BP35913 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PDE6BP35913 GLB1-203ENST00000399402 2512 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
PDE6BP35913 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PDE6BP35913 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PDE6BP35913 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.59■□□□□ 0.25
PDE6BP35913 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PDE6BP35913 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
PDE6BP35913 AL390755.1-201ENST00000623716 2027 ntBASIC16.59■□□□□ 0.25
PDE6BP35913 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PDE6BP35913 NAT8B-201ENST00000377712 765 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
PDE6BP35913 SNORA50C-201ENST00000408535 133 ntBASIC16.59■□□□□ 0.25
PDE6BP35913 AL121994.1-201ENST00000413189 402 ntBASIC16.59■□□□□ 0.25
PDE6BP35913 AC013436.1-201ENST00000425077 422 ntTSL 3 BASIC16.59■□□□□ 0.25
PDE6BP35913 AL590399.1-204ENST00000430302 781 ntTSL 5 BASIC16.59■□□□□ 0.25
PDE6BP35913 AL355500.1-201ENST00000439421 297 ntTSL 3 BASIC16.59■□□□□ 0.25
PDE6BP35913 TMA16-204ENST00000508268 608 ntTSL 2 BASIC16.59■□□□□ 0.25
PDE6BP35913 AP003108.1-201ENST00000534856 554 ntTSL 4 BASIC16.59■□□□□ 0.25
PDE6BP35913 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PDE6BP35913 LAMTOR1-208ENST00000545249 965 ntTSL 3 BASIC16.59■□□□□ 0.25
PDE6BP35913 RN7SL202P-201ENST00000584410 262 ntBASIC16.59■□□□□ 0.25
PDE6BP35913 NSRP1-213ENST00000584423 482 ntTSL 2 BASIC16.59■□□□□ 0.25
PDE6BP35913 FAM90A28P-201ENST00000596881 489 ntTSL 5 BASIC16.59■□□□□ 0.25
PDE6BP35913 PAX8-AS1-219ENST00000623306 840 ntTSL 5 BASIC16.59■□□□□ 0.25
PDE6BP35913 SNORA50.1-201ENST00000628590 135 ntBASIC16.59■□□□□ 0.25
PDE6BP35913 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
PDE6BP35913 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PDE6BP35913 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PDE6BP35913 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PDE6BP35913 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PDE6BP35913 RUSC1-AS1-202ENST00000446880 1836 ntTSL 2 BASIC16.59■□□□□ 0.25
PDE6BP35913 SRL-202ENST00000537996 1814 ntTSL 2 BASIC16.59■□□□□ 0.25
PDE6BP35913 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PDE6BP35913 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PDE6BP35913 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PDE6BP35913 OR2I1P-209ENST00000641730 5365 ntBASIC16.58■□□□□ 0.25
PDE6BP35913 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms