Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
GAPDHP04406 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
GAPDHP04406 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC11.53□□□□□ -0.56
GAPDHP04406 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
GAPDHP04406 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
GAPDHP04406 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
GAPDHP04406 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
GAPDHP04406 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
GAPDHP04406 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
GAPDHP04406 TGM7-201ENST00000452443 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
GAPDHP04406 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
GAPDHP04406 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
GAPDHP04406 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
GAPDHP04406 SARS-202ENST00000369923 1882 ntTSL 5 BASIC11.53□□□□□ -0.56
GAPDHP04406 TROVE2-206ENST00000400968 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
GAPDHP04406 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC11.53□□□□□ -0.56
GAPDHP04406 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC11.53□□□□□ -0.56
GAPDHP04406 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
GAPDHP04406 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
GAPDHP04406 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
GAPDHP04406 CPLX4-202ENST00000587244 1916 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
GAPDHP04406 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
GAPDHP04406 PPP1R11-204ENST00000376769 1689 ntTSL 2 BASIC11.52□□□□□ -0.56
GAPDHP04406 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
GAPDHP04406 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
GAPDHP04406 DUSP14-205ENST00000614411 2207 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.56
GAPDHP04406 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
GAPDHP04406 AC020917.4-201ENST00000623994 1999 ntBASIC11.52□□□□□ -0.56
GAPDHP04406 AC138028.6-201ENST00000616106 1482 ntBASIC11.52□□□□□ -0.56
GAPDHP04406 AMT-256ENST00000638063 1783 ntTSL 5 BASIC11.52□□□□□ -0.57
GAPDHP04406 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
GAPDHP04406 HOXB13-201ENST00000290295 3467 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
GAPDHP04406 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
GAPDHP04406 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
GAPDHP04406 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
GAPDHP04406 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
GAPDHP04406 RNA5SP359-201ENST00000364838 113 ntBASIC11.52□□□□□ -0.57
GAPDHP04406 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
GAPDHP04406 AC239868.1-201ENST00000369385 493 ntBASIC11.52□□□□□ -0.57
GAPDHP04406 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
GAPDHP04406 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
GAPDHP04406 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
GAPDHP04406 AC016700.1-201ENST00000429424 312 ntBASIC11.52□□□□□ -0.57
GAPDHP04406 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
GAPDHP04406 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC11.52□□□□□ -0.57
GAPDHP04406 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
GAPDHP04406 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC11.52□□□□□ -0.57
GAPDHP04406 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC11.52□□□□□ -0.57
GAPDHP04406 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC11.52□□□□□ -0.57
GAPDHP04406 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
GAPDHP04406 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC11.52□□□□□ -0.57
GAPDHP04406 AC093752.3-201ENST00000567343 901 ntBASIC11.52□□□□□ -0.57
GAPDHP04406 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC11.52□□□□□ -0.57
GAPDHP04406 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC11.52□□□□□ -0.57
GAPDHP04406 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
GAPDHP04406 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC11.52□□□□□ -0.57
GAPDHP04406 AL022334.2-201ENST00000610000 484 ntBASIC11.52□□□□□ -0.57
GAPDHP04406 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
GAPDHP04406 REXO5-208ENST00000564274 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
GAPDHP04406 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
GAPDHP04406 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
GAPDHP04406 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
GAPDHP04406 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC11.52□□□□□ -0.57
GAPDHP04406 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
GAPDHP04406 USP39-220ENST00000613444 2161 ntTSL 2 BASIC11.52□□□□□ -0.57
GAPDHP04406 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
GAPDHP04406 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
GAPDHP04406 FRMPD2B-201ENST00000431305 1347 ntBASIC11.52□□□□□ -0.57
GAPDHP04406 TUBBP5-203ENST00000508529 1334 ntBASIC11.52□□□□□ -0.57
GAPDHP04406 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC11.52□□□□□ -0.57
GAPDHP04406 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC11.52□□□□□ -0.57
GAPDHP04406 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
GAPDHP04406 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC11.52□□□□□ -0.57
GAPDHP04406 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
GAPDHP04406 REXO1L1P-201ENST00000379010 6598 ntBASIC11.52□□□□□ -0.57
GAPDHP04406 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC11.52□□□□□ -0.57
GAPDHP04406 LINC01993-201ENST00000374945 2934 ntTSL 2 BASIC11.52□□□□□ -0.57
GAPDHP04406 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
GAPDHP04406 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
GAPDHP04406 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC11.52□□□□□ -0.57
GAPDHP04406 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
GAPDHP04406 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
GAPDHP04406 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC11.52□□□□□ -0.57
GAPDHP04406 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
GAPDHP04406 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
GAPDHP04406 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
GAPDHP04406 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC11.51□□□□□ -0.57
GAPDHP04406 COX7A2L-202ENST00000378669 3056 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
GAPDHP04406 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
GAPDHP04406 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
GAPDHP04406 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC11.51□□□□□ -0.57
GAPDHP04406 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
GAPDHP04406 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
GAPDHP04406 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
GAPDHP04406 AL139158.3-201ENST00000641212 1562 ntBASIC11.51□□□□□ -0.57
GAPDHP04406 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
GAPDHP04406 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC11.51□□□□□ -0.57
GAPDHP04406 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
GAPDHP04406 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
GAPDHP04406 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms