Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 RPL29P2-202ENST00000498671 657 ntBASIC12.25□□□□□ -0.45
ZIC3O60481 PGAM1P12-201ENST00000505622 748 ntBASIC12.25□□□□□ -0.45
ZIC3O60481 TBC1D3P6-201ENST00000505954 962 ntBASIC12.25□□□□□ -0.45
ZIC3O60481 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ZIC3O60481 TREHP1-201ENST00000531328 465 ntBASIC12.25□□□□□ -0.45
ZIC3O60481 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC12.25□□□□□ -0.45
ZIC3O60481 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC12.25□□□□□ -0.45
ZIC3O60481 USB1-205ENST00000561743 1135 ntTSL 3 BASIC12.25□□□□□ -0.45
ZIC3O60481 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC12.25□□□□□ -0.45
ZIC3O60481 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC12.25□□□□□ -0.45
ZIC3O60481 AC007998.2-201ENST00000589258 455 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
ZIC3O60481 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
ZIC3O60481 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC12.25□□□□□ -0.45
ZIC3O60481 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC12.25□□□□□ -0.45
ZIC3O60481 MIR6746-201ENST00000620971 63 ntBASIC12.25□□□□□ -0.45
ZIC3O60481 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC12.25□□□□□ -0.45
ZIC3O60481 AC026336.4-201ENST00000624565 1050 ntBASIC12.25□□□□□ -0.45
ZIC3O60481 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC12.25□□□□□ -0.45
ZIC3O60481 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZIC3O60481 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ZIC3O60481 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
ZIC3O60481 LINC00943-204ENST00000537374 1688 ntTSL 5 BASIC12.25□□□□□ -0.45
ZIC3O60481 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZIC3O60481 POM121L4P-202ENST00000427789 1891 ntBASIC12.25□□□□□ -0.45
ZIC3O60481 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZIC3O60481 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC12.25□□□□□ -0.45
ZIC3O60481 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZIC3O60481 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ZIC3O60481 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZIC3O60481 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
ZIC3O60481 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZIC3O60481 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZIC3O60481 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC12.24□□□□□ -0.45
ZIC3O60481 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
ZIC3O60481 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ZIC3O60481 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
ZIC3O60481 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
ZIC3O60481 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC12.24□□□□□ -0.45
ZIC3O60481 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZIC3O60481 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZIC3O60481 MRRF-201ENST00000297908 1841 ntTSL 2 BASIC12.24□□□□□ -0.45
ZIC3O60481 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZIC3O60481 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZIC3O60481 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZIC3O60481 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZIC3O60481 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
ZIC3O60481 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC12.24□□□□□ -0.45
ZIC3O60481 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZIC3O60481 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
ZIC3O60481 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
ZIC3O60481 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZIC3O60481 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC12.24□□□□□ -0.45
ZIC3O60481 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC12.24□□□□□ -0.45
ZIC3O60481 SERF2-206ENST00000409291 807 ntTSL 3 BASIC12.24□□□□□ -0.45
ZIC3O60481 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC12.24□□□□□ -0.45
ZIC3O60481 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
ZIC3O60481 AL357079.1-203ENST00000412378 494 ntTSL 5 BASIC12.24□□□□□ -0.45
ZIC3O60481 AL627389.1-201ENST00000413508 1182 ntBASIC12.24□□□□□ -0.45
ZIC3O60481 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ZIC3O60481 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC12.24□□□□□ -0.45
ZIC3O60481 BCAS2P2-201ENST00000425064 674 ntBASIC12.24□□□□□ -0.45
ZIC3O60481 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
ZIC3O60481 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ZIC3O60481 AC092810.2-201ENST00000431570 362 ntBASIC12.24□□□□□ -0.45
ZIC3O60481 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ZIC3O60481 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ZIC3O60481 AL135901.1-201ENST00000451812 333 ntBASIC12.24□□□□□ -0.45
ZIC3O60481 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC12.24□□□□□ -0.45
ZIC3O60481 BPIFB5P-201ENST00000457066 1099 ntBASIC12.24□□□□□ -0.45
ZIC3O60481 RN7SL494P-201ENST00000461517 304 ntBASIC12.24□□□□□ -0.45
ZIC3O60481 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC12.24□□□□□ -0.45
ZIC3O60481 AC092903.1-201ENST00000466506 262 ntBASIC12.24□□□□□ -0.45
ZIC3O60481 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC12.24□□□□□ -0.45
ZIC3O60481 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
ZIC3O60481 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC12.24□□□□□ -0.45
ZIC3O60481 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC12.24□□□□□ -0.45
ZIC3O60481 BCDIN3D-AS1-202ENST00000549124 468 ntTSL 3 BASIC12.24□□□□□ -0.45
ZIC3O60481 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC12.24□□□□□ -0.45
ZIC3O60481 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC12.24□□□□□ -0.45
ZIC3O60481 MEIS2-215ENST00000559561 1442 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
ZIC3O60481 C2orf69P1-201ENST00000563532 1093 ntBASIC12.24□□□□□ -0.45
ZIC3O60481 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ZIC3O60481 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC12.24□□□□□ -0.45
ZIC3O60481 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC12.24□□□□□ -0.45
ZIC3O60481 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ZIC3O60481 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC12.24□□□□□ -0.45
ZIC3O60481 AC127024.7-201ENST00000625101 200 ntBASIC12.24□□□□□ -0.45
ZIC3O60481 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ZIC3O60481 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZIC3O60481 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZIC3O60481 AC126335.2-201ENST00000623362 4637 ntBASIC12.24□□□□□ -0.45
ZIC3O60481 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC12.24□□□□□ -0.45
ZIC3O60481 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
ZIC3O60481 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZIC3O60481 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZIC3O60481 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZIC3O60481 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ZIC3O60481 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ZIC3O60481 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZIC3O60481 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms