Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 SSR4-202ENST00000370085 526 ntTSL 2 BASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 KRT18P62-201ENST00000446618 1287 ntBASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 AC006529.1-201ENST00000459978 637 ntBASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 PTK2-225ENST00000520892 571 ntTSL 4 BASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 AC013553.1-201ENST00000560906 267 ntBASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 AL049840.2-201ENST00000602722 535 ntBASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 AC011247.3-201ENST00000603297 438 ntBASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 FO393412.1-201ENST00000619841 382 ntBASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 STK3-218ENST00000617590 2485 ntTSL 5 BASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NPIPA3F8WFD2 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
NPIPA3F8WFD2 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
NPIPA3F8WFD2 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC12.5□□□□□ -0.41
NPIPA3F8WFD2 AC089987.1-201ENST00000551654 2209 ntBASIC12.5□□□□□ -0.41
NPIPA3F8WFD2 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NPIPA3F8WFD2 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
NPIPA3F8WFD2 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
NPIPA3F8WFD2 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
NPIPA3F8WFD2 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NPIPA3F8WFD2 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC12.5□□□□□ -0.41
NPIPA3F8WFD2 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
NPIPA3F8WFD2 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NPIPA3F8WFD2 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
NPIPA3F8WFD2 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NPIPA3F8WFD2 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
NPIPA3F8WFD2 CACNA1F-202ENST00000376251 5813 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NPIPA3F8WFD2 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC12.5□□□□□ -0.41
NPIPA3F8WFD2 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
NPIPA3F8WFD2 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NPIPA3F8WFD2 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
NPIPA3F8WFD2 NME4-203ENST00000397722 1232 ntTSL 2 BASIC12.5□□□□□ -0.41
NPIPA3F8WFD2 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NPIPA3F8WFD2 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC12.5□□□□□ -0.41
NPIPA3F8WFD2 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC12.5□□□□□ -0.41
NPIPA3F8WFD2 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NPIPA3F8WFD2 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC12.5□□□□□ -0.41
NPIPA3F8WFD2 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC12.5□□□□□ -0.41
NPIPA3F8WFD2 AC093826.1-201ENST00000508655 993 ntBASIC12.5□□□□□ -0.41
NPIPA3F8WFD2 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC12.5□□□□□ -0.41
NPIPA3F8WFD2 COX5A-205ENST00000568517 582 ntTSL 3 BASIC12.5□□□□□ -0.41
NPIPA3F8WFD2 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
NPIPA3F8WFD2 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NPIPA3F8WFD2 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NPIPA3F8WFD2 FMO6P-201ENST00000236166 1620 ntBASIC12.5□□□□□ -0.41
NPIPA3F8WFD2 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NPIPA3F8WFD2 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC12.5□□□□□ -0.41
NPIPA3F8WFD2 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC12.5□□□□□ -0.41
NPIPA3F8WFD2 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
NPIPA3F8WFD2 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
NPIPA3F8WFD2 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NPIPA3F8WFD2 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC12.5□□□□□ -0.41
NPIPA3F8WFD2 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC12.5□□□□□ -0.41
NPIPA3F8WFD2 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
NPIPA3F8WFD2 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NPIPA3F8WFD2 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms