Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
VGLL1Q99990 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
VGLL1Q99990 IKZF1-211ENST00000440768 5511 ntTSL 5 BASIC10.47□□□□□ -0.73
VGLL1Q99990 AC011481.3-201ENST00000623895 5594 ntBASIC10.47□□□□□ -0.73
VGLL1Q99990 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC10.47□□□□□ -0.73
VGLL1Q99990 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC10.46□□□□□ -0.73
VGLL1Q99990 RNF115-202ENST00000582693 9117 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
VGLL1Q99990 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
VGLL1Q99990 FLNA-202ENST00000360319 8281 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
VGLL1Q99990 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
VGLL1Q99990 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
VGLL1Q99990 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
VGLL1Q99990 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
VGLL1Q99990 SUPT20HL1-201ENST00000436466 2618 ntBASIC10.46□□□□□ -0.73
VGLL1Q99990 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
VGLL1Q99990 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
VGLL1Q99990 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
VGLL1Q99990 XIRP1-201ENST00000340369 6460 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
VGLL1Q99990 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC10.46□□□□□ -0.73
VGLL1Q99990 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
VGLL1Q99990 TNFRSF8-201ENST00000263932 3686 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
VGLL1Q99990 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
VGLL1Q99990 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
VGLL1Q99990 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC10.46□□□□□ -0.73
VGLL1Q99990 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC10.46□□□□□ -0.73
VGLL1Q99990 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC10.46□□□□□ -0.73
VGLL1Q99990 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
VGLL1Q99990 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC10.46□□□□□ -0.73
VGLL1Q99990 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
VGLL1Q99990 OARD1-212ENST00000482515 832 ntTSL 2 BASIC10.46□□□□□ -0.73
VGLL1Q99990 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
VGLL1Q99990 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC10.46□□□□□ -0.73
VGLL1Q99990 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.73
VGLL1Q99990 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
VGLL1Q99990 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC10.46□□□□□ -0.73
VGLL1Q99990 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC10.46□□□□□ -0.73
VGLL1Q99990 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC10.46□□□□□ -0.73
VGLL1Q99990 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC10.46□□□□□ -0.73
VGLL1Q99990 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC10.46□□□□□ -0.73
VGLL1Q99990 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC10.46□□□□□ -0.73
VGLL1Q99990 KLK11-210ENST00000600362 759 ntTSL 3 BASIC10.46□□□□□ -0.73
VGLL1Q99990 TP53-221ENST00000615910 1149 ntTSL 5 BASIC10.46□□□□□ -0.73
VGLL1Q99990 AL162274.1-201ENST00000617191 1098 ntBASIC10.46□□□□□ -0.73
VGLL1Q99990 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC10.46□□□□□ -0.73
VGLL1Q99990 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
VGLL1Q99990 KRT8P29-201ENST00000420409 1371 ntBASIC10.46□□□□□ -0.74
VGLL1Q99990 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
VGLL1Q99990 MESD-201ENST00000261758 4264 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
VGLL1Q99990 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC10.46□□□□□ -0.74
VGLL1Q99990 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC10.46□□□□□ -0.74
VGLL1Q99990 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC10.46□□□□□ -0.74
VGLL1Q99990 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC10.46□□□□□ -0.74
VGLL1Q99990 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC10.46□□□□□ -0.74
VGLL1Q99990 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
VGLL1Q99990 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC10.46□□□□□ -0.74
VGLL1Q99990 SARS-202ENST00000369923 1882 ntTSL 5 BASIC10.46□□□□□ -0.74
VGLL1Q99990 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
VGLL1Q99990 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC10.46□□□□□ -0.74
VGLL1Q99990 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
VGLL1Q99990 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC10.46□□□□□ -0.74
VGLL1Q99990 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC10.46□□□□□ -0.74
VGLL1Q99990 PXK-210ENST00000479241 2817 ntTSL 2 BASIC10.46□□□□□ -0.74
VGLL1Q99990 IL12RB1-207ENST00000600835 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
VGLL1Q99990 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
VGLL1Q99990 BDH1-201ENST00000358186 3330 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
VGLL1Q99990 NLRP2-202ENST00000339757 3422 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.74
VGLL1Q99990 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
VGLL1Q99990 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
VGLL1Q99990 AL031708.1-201ENST00000454337 5326 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
VGLL1Q99990 MYO1D-202ENST00000394649 5451 ntTSL 5 BASIC10.46□□□□□ -0.74
VGLL1Q99990 TMEM56-201ENST00000370203 6822 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
VGLL1Q99990 ACSS3-203ENST00000548058 9254 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
VGLL1Q99990 L1CAM-202ENST00000361981 5004 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
VGLL1Q99990 DNAH10OS-201ENST00000514254 5040 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
VGLL1Q99990 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
VGLL1Q99990 GPR173-201ENST00000332582 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
VGLL1Q99990 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC10.45□□□□□ -0.74
VGLL1Q99990 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
VGLL1Q99990 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
VGLL1Q99990 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC10.45□□□□□ -0.74
VGLL1Q99990 SLC26A8-202ENST00000394602 3144 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
VGLL1Q99990 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC10.45□□□□□ -0.74
VGLL1Q99990 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC10.45□□□□□ -0.74
VGLL1Q99990 AC012531.1-201ENST00000562848 2680 ntBASIC10.45□□□□□ -0.74
VGLL1Q99990 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC10.45□□□□□ -0.74
VGLL1Q99990 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
VGLL1Q99990 CMC2-201ENST00000219400 10301 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
VGLL1Q99990 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
VGLL1Q99990 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
VGLL1Q99990 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
VGLL1Q99990 AC004899.1-201ENST00000424687 1714 ntBASIC10.45□□□□□ -0.74
VGLL1Q99990 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC10.45□□□□□ -0.74
VGLL1Q99990 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC10.45□□□□□ -0.74
VGLL1Q99990 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
VGLL1Q99990 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
VGLL1Q99990 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
VGLL1Q99990 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
VGLL1Q99990 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
VGLL1Q99990 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
VGLL1Q99990 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms